Pyramidobacter sp. YE332: RAH42_05975
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Entry
RAH42_05975 CDS
T09677
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pyy
Pyramidobacter sp. YE332
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pyy03032
]
RAH42_05975
03036 Chromosome and associated proteins [BR:
pyy03036
]
RAH42_05975
03400 DNA repair and recombination proteins [BR:
pyy03400
]
RAH42_05975
DNA replication proteins [BR:
pyy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RAH42_05975
Chromosome and associated proteins [BR:
pyy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RAH42_05975
DNA repair and recombination proteins [BR:
pyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RAH42_05975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
WOL41182
UniProt:
A0AAU0KES4
LinkDB
All DBs
Position
complement(1283654..1283971)
Genome browser
AA seq
105 aa
AA seq
DB search
MQAFRIDNLRRQRKMTKNDLINEVAANAGMSKKAAGEAISATFAAIEKALAKGDRVQLVG
FGTFEVRKRAARVGRNPQDPKKTIQIPAKKVPVFRAGKGLKDQVN
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcttttcgtattgataatttaaggaggcagagaaaaatgacaaagaacgatctg
atcaacgaagttgccgcaaatgctggaatgagcaagaaggcggcgggcgaggcgatttcg
gctacttttgctgcgatcgagaaggcccttgccaagggagacagggttcagctggtcggt
ttcggcacattcgaagtccgcaagcgtgccgcccgcgtggggcgcaatccccaggatccc
aagaagacgatccagattcccgccaagaaggtgcccgttttccgcgccggcaaaggcctc
aaagaccaggtcaactaa
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