Pyramidobacter sp. YE332: RAH42_05980
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Entry
RAH42_05980 CDS
T09677
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pyy
Pyramidobacter sp. YE332
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pyy03009
]
RAH42_05980 (der)
Ribosome biogenesis [BR:
pyy03009
]
Prokaryotic type
GTPases
RAH42_05980 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
AIG1
Dynamin_N
RsgA_GTPase
Roc
Ras
cobW
ABC_tran
MMR_HSR1_Xtn
SRPRB
PduV-EutP
MCM
HflX_C
MnmE_helical
PTEN2_C2
Glyco_hydro_17
Hfq_1
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
WOL41183
LinkDB
All DBs
Position
complement(1284028..1285359)
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AA seq
443 aa
AA seq
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MAIVSIVGRPNVGKSSLFNRIIGERRAIVDDMPGVTRDRLYGCVQWQDKSFYVVDTGGLL
LKDKDPIMESMKDQIFQAIEESDVVIFMIDGSQGVTWMDKDVAQVLRSHSSMVILAVNKI
DDFSHEDDVVEAYSLGFEKVVGVSALHDRGVDELLDQIVQMLGDKGDAQGAEEGVINVAL
VGRPNVGKSSILNALTGSRRSLVSDIPGTTRDSIDAVLEYKGERFRIVDTAGLRRKSRVK
DDIEFYSTVRAMDAVDQCDVAVFVMDARELATEQDQRLVGEILARGKGVVLVVNKWDLLP
NTPETGDEVNGKLREEFRFVSHAPVLFTSAVSGRRLHRLLDLVSRVHKRRQSRFSTTVLN
RIIRDMLAFDRLPTDGTGRRLRIYYCTQSAAVPPTFIFFVNDTSIVTKSFENHLSRKIRE
AGDFAGVPLRLFWRSSHGSNEKA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcaatagtgtcgatcgtcggacgtcccaacgtagggaagtcatcgctgttcaacagg
atcatcggcgaacgccgggctatcgtcgacgatatgccgggcgttacgcgcgaccgtttg
tatggctgcgtgcaatggcaggataaaagtttttacgtggtcgataccggcggcctgctg
ctgaaagacaaagacccgatcatggagagcatgaaagatcagatattccaggccatcgaa
gagagcgacgtcgtgatcttcatgatcgacggcagtcagggcgtcacctggatggacaaa
gacgtggcccaggtgcttcgttctcattcttcgatggtcattctcgcggtcaataaaata
gacgacttcagtcacgaggacgacgtcgtcgaagcctattcgcttggcttcgaaaaagtc
gttggggtcagcgcgcttcatgaccgcggcgttgacgagcttttggaccagatcgtgcag
atgctgggcgataaaggagacgcgcagggggcggaagaaggcgtcatcaacgtggcgctc
gtcggccgtcccaacgtgggcaagtcgagcatcctcaacgcgctgacgggcagccggcgg
tcgctggtcagcgacatcccgggaacgacccgcgattcgatcgacgccgtgctcgagtat
aagggagaacgcttccgcattgtcgatacggccggtctgcgccgcaaaagccgggtcaag
gacgacatcgagttttattcgacggtgcgggccatggacgcggtcgaccagtgcgacgtg
gccgtcttcgtgatggacgcgcgggaactggcgacggagcaggatcagcgtctggtgggg
gagattctcgcccgcggcaagggcgtcgtcctcgtggtcaacaaatgggatttgctgccg
aacacgccggagaccggcgacgaagtgaacgggaaactccgcgaggagttccgcttcgtc
agccatgcgccggtgcttttcacgtcggccgtttccgggcgccgtctgcaccggctgctc
gatctggtcagccgggtgcacaagcgccgccaatccagattcagcacgacggtattgaac
cgcattatccgcgacatgctggcttttgaccgtctgccgacggacggcacgggacgccgg
ctgcggatctattactgcacgcagagcgccgcggtaccgccgacgttcatcttcttcgtc
aacgacacttcgatcgtgacgaagagctttgagaaccatctgtcaagaaaaatccgcgaa
gcgggagattttgccggcgttccgctgcgtcttttttggcgttccagccatggaagcaac
gaaaaggcttga
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