Pyramidobacter sp. YE332: RAH42_06850
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Entry
RAH42_06850 CDS
T09677
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pyy
Pyramidobacter sp. YE332
Pathway
pyy03030
DNA replication
pyy03430
Mismatch repair
pyy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RAH42_06850
03430 Mismatch repair
RAH42_06850
03440 Homologous recombination
RAH42_06850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pyy03032
]
RAH42_06850
03400 DNA repair and recombination proteins [BR:
pyy03400
]
RAH42_06850
Enzymes [BR:
pyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RAH42_06850
DNA replication proteins [BR:
pyy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RAH42_06850
DNA repair and recombination proteins [BR:
pyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RAH42_06850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WOL38881
LinkDB
All DBs
Position
complement(1454926..1455981)
Genome browser
AA seq
351 aa
AA seq
DB search
MNREADIFLPAEKGYVVLDVESQGYVRFCPIEISAVRFAPDGQCLDAYSSLVRPRVARVS
RYVSDLTGITTDMVRRAPLPREVIGSLRDFIGDSVIVGHAVAENDLPIIDHFCQELYHAR
LENVYVDTFYWAQALFPALGTGHYNLKALAEHFVIDAQTFHRAEADCRTTARLYQILHDA
AQRLPDAERIQVLHDFAHKNDPKKPIRKSAKGTAKKTSGNVIDYNSLPVFEAGDEKAAVI
HLWHARKQICVEVRFAGSVPEAADKFMDRHRECLWQAYLPNLRVADSVSLPVLKQLWKIL
RAQGCRLYRRADVRFEGLEAHEAKKEGAAKNRSCRRKRKTEPSIAACTGSD
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagaggcggatatttttcttccggcggagaagggctacgtggtgctcgacgtc
gaatctcaaggctacgtccggttttgtccgatcgaaatttccgcggtccgcttcgctcct
gacgggcagtgccttgacgcgtacagctcccttgtgcgcccgcgggtggcgcgggtgtct
cgttacgtctccgatctgaccggcattaccaccgacatggtgcgccgtgcgccgcttccc
cgtgaggtgatcggctcgctccgcgatttcatcggcgatagcgtgattgtcgggcatgcg
gtggcggaaaacgatcttcccattatcgatcacttttgtcaggagctttatcacgcccgg
cttgaaaacgtgtacgtagatactttctactgggctcaagcgctctttccggcgctgggg
accggacattacaacttgaaagcgctggcggagcattttgtgatcgacgcgcagactttt
catcgggccgaggccgactgccgcacgaccgcccggctgtaccagatccttcacgacgcg
gcgcagaggttgcccgacgccgaaaggatacaggtgctgcacgatttcgcccataagaac
gatcccaagaagccgatccggaagagcgcaaaggggacggcgaaaaagacgtccggtaac
gttatcgattacaacagccttccggttttcgaggcgggcgacgaaaaagccgcggtaatc
cacctgtggcacgcaaggaagcaaatctgcgtcgaagtgcgtttcgcaggcagcgttccc
gaggcggccgacaagtttatggaccgccatcgcgagtgcctttggcaagcgtatttgccg
aatctgcgcgttgccgacagcgtttcgctgccggtgctgaagcagctgtggaagatcctg
cgcgcgcaggggtgccgcttgtatcggcgggcggacgtcaggttcgaagggctggaggcc
catgaagcgaaaaaagagggcgccgccaaaaatcgctcctgccgcagaaaacggaaaacg
gagccatccatagcggcttgcaccgggtcggattga
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