Pyramidobacter sp. YE332: RAH42_07615
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Entry
RAH42_07615 CDS
T09677
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pyy
Pyramidobacter sp. YE332
Pathway
pyy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RAH42_07615 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyy03400
]
RAH42_07615 (recO)
DNA repair and recombination proteins [BR:
pyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RAH42_07615 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RAH42_07615 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
LIM
Trm112p
Motif
Other DBs
NCBI-ProteinID:
WOL39030
LinkDB
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Position
complement(1614001..1614744)
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AA seq
247 aa
AA seq
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MERLGKGIEKTGIRIDLPEETSQRLIKRTGVVLRRGNYMEGDIAALLFLKSGGTNWVYVP
GASKGSMRFGGALEPFVWGHYQLYQSKRKTYLKEIEVTEDFWALRRYPRAVIQAVRWAKM
FERHLIPGYPYDDLLALFYWALKALSEGAAPELLDARFLWRWLLSWGIAPDLLSCSACGK
PLGGRAVWQEGTFVCTNCAHGQSPVDIDEFAAYALSKSFVPENGTSKLLKQARNVRQLFV
RNLDDNR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggagagactcggaaaaggaattgaaaagactgggatacgaatagaccttccggaggag
acgtctcagcgtctcatcaagcggacgggcgtcgtgctgcggcgcggaaactacatggaa
ggcgatatcgccgcgttgttgtttttaaaaagcggcggcacgaattgggtgtacgtcccc
ggagcctcgaaagggtcgatgcgtttcggcggcgccttggagcctttcgtctggggacat
taccagctttatcagtcaaaaagaaagacgtatctgaaggaaatcgaagtcaccgaggac
ttctgggcgctgcgacgctatccgcgggccgtgatccaggccgttcgctgggcgaagatg
tttgaacggcacttgattcccggttatccctacgacgatttgttggctctcttctattgg
gcgttgaaggcgctgagcgaaggcgccgcgccggaactgctcgatgcgcgttttttatgg
cgctggctcctcagctgggggatcgcgcctgatctgctctcctgcagcgcctgtggaaag
cctttgggcggacgcgccgtctggcaggaggggacctttgtctgtacgaactgcgctcac
gggcagagcccggtcgacatcgatgaattcgcggcttacgccctttcgaaaagctttgta
ccggagaacggcacatcgaaattgttgaaacaggcccgaaatgtccggcaactctttgtg
agaaaccttgatgataatcgatag
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