Pyramidobacter sp. YE332: RAH42_08410
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Entry
RAH42_08410 CDS
T09677
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pyy
Pyramidobacter sp. YE332
Pathway
pyy03030
DNA replication
pyy03430
Mismatch repair
pyy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RAH42_08410 (dnaX)
03430 Mismatch repair
RAH42_08410 (dnaX)
03440 Homologous recombination
RAH42_08410 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pyy03032
]
RAH42_08410 (dnaX)
03400 DNA repair and recombination proteins [BR:
pyy03400
]
RAH42_08410 (dnaX)
Enzymes [BR:
pyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RAH42_08410 (dnaX)
DNA replication proteins [BR:
pyy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RAH42_08410 (dnaX)
DNA repair and recombination proteins [BR:
pyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RAH42_08410 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
TIP49
RCF1-5-like_lid
RuvB_N
AAA_5
AAA_16
AAA_30
AAA_14
AAA_19
Rad17
Mg_chelatase
AAA_assoc_2
Viral_helicase1
Sigma54_activ_2
AAA_18
AAA_28
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
WOL39175
UniProt:
A0AAU0K8U3
LinkDB
All DBs
Position
complement(1782085..1784037)
Genome browser
AA seq
650 aa
AA seq
DB search
MYISLYRRYRPQKFSDVVGQSAAIGVITRAIESGAIGHAYLFSGPRGCGKTTVARLFAKA
ANCPHRTGAEPCNECETCRAIREGSCLDVIEIDGASNNSVDEIRNLKEHVALASFTCPYK
VYIIDEVHMLSISAFNALLKTLEEPPERVIFVLATTAPHKVPVTIRSRCQHIPFHGMTLE
QIVNRLQQVAEAENLDARDEALWEIARNSEGGMRDALSLMEQAIALGSGSVTRETVDKLL
GGGSSSSIRQWLSGSHAAPENSLPVLEGLFRSGAEPERFLSVLFVCVRNLWLQKRWGEKI
LRALALSEEERQWLAQEKDFLPLPHLEELMARIASLLPQVRRGLSIDVLCGLLVSWTLKS
AASEVPPDGKTVSSATAVSSGGRAARLRSDARDTVVPAFAPARNGPSESAASAAQKIQTA
PETGIPSCEKAADAESGGSPSAAEAPPAESIGSPVPLHNNVKDALLSAVEKHPNVAVPLC
LADIVYDRERRELGVLLNEDDVQAYETLNSERMAKAAQSVLRLDDLAIQSIKLQCGSRVE
RFDHLDAGSVPENAPLQLALAEDQPGKDSPYADFLRHDAETAASERLEKKNLVPTKQPLL
LRGTVRLRSICGELSWMEICCTVVPTKRPTTPPTGMIPEKRKAGRSNVFV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
gtgtatatatccctctatcggcggtacagaccgcaaaagttctccgacgtcgtcggccag
tccgcggcaatcggcgtgatcacacgcgctatcgaaagcggcgcgataggtcatgcctat
cttttttccggcccgagaggctgtggaaaaaccaccgtggcgcgtctctttgcaaaggcg
gcaaactgcccgcacagaacgggggccgagccttgcaatgaatgcgaaacgtgccgggcc
atccgcgaggggagctgtcttgacgtcattgagatagacggcgcttccaacaacagcgtc
gacgagattcgcaatctcaaagaacacgtcgctctggcgtcgtttacttgcccgtataaa
gtttacatcatcgacgaagtccacatgctgtcgatcagcgctttcaacgcgcttctgaag
acgctcgaagaaccccctgaacgcgtgatattcgttctggcaacgacggcccctcacaaa
gtgcccgtgacgatccgttcccgctgtcagcatattccgttccacggcatgacgttggaa
cagatcgtcaatcgtttgcagcaggttgcggaagcggagaatctcgatgcccgggatgaa
gcgctgtgggagatcgcccgtaattcggaaggcggcatgcgcgatgcgctgtccctgatg
gagcaggcgatcgctttaggctccggcagcgtgacgcgggagacggtggataaacttttg
gggggcggcagttcgtcctcgatccgtcaatggctgtccggcagtcatgcagcgccggag
aattcgctccccgttttggaaggactcttccgttcgggcgcggagcctgaacgcttcctg
tcggtgctgtttgtgtgcgtacggaatttgtggctgcaaaagcgctggggcgagaagatc
ctgcgcgccttggcgctttcggaagaagagcgtcagtggctggcgcaggagaaagatttt
ctgcctttgccgcaccttgaagaattaatggcgcggattgcttctctcttgcctcaggtc
cgacgcggactttcgatcgatgttctgtgcgggctgttggtcagctggactctgaagagc
gccgcctctgaagtgccgccggatggaaagactgtctcgtcggcgacggcggtctcttct
gggggacgcgcggcgcggcttcgaagcgacgcgcgcgatacggtcgttcccgcgttcgct
ccggcacggaacggtccgtcggagagcgcggcctcggcggcgcagaagatccagaccgcc
cctgaaacagggataccgtcttgcgaaaaagccgccgacgcggagagcggcggttcccct
tctgcggcggaggcccctcctgcggagagcatcggcagtccggtccctcttcacaataac
gtgaaagacgctcttctttccgccgtggaaaaacaccccaacgtcgcggtgccgttatgt
cttgcggatatcgtgtatgaccgggagagacgggaattgggcgtcctcctgaacgaagac
gacgttcaggcatacgagacgctgaacagcgagcgcatggccaaagcggctcagtcggtc
ctgcggctggacgatctggcgattcagtccataaaactccaatgtggaagccgcgtcgag
cgtttcgatcatctcgatgcgggttctgtccccgagaatgcgcctctgcagctggcgctc
gcggaggatcagcccgggaaggactcgccgtatgcggattttctgcgccatgacgcggaa
acggccgcttcggagcgtcttgagaaaaagaatctcgtcccgacaaagcagccccttctc
cttcgaggaacagtacgcttgcggagtatctgcggggaactttcatggatggagatctgc
tgtactgtcgtcccaacgaaaagaccgacgacgcccccgacgggaatgattcctgagaag
cggaaagccgggcgttcgaacgtgtttgtatga
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