Pyramidobacter sp. YE332: RAH42_08750
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Entry
RAH42_08750 CDS
T09677
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
pyy
Pyramidobacter sp. YE332
Pathway
pyy00010
Glycolysis / Gluconeogenesis
pyy00020
Citrate cycle (TCA cycle)
pyy00620
Pyruvate metabolism
pyy00650
Butanoate metabolism
pyy01100
Metabolic pathways
pyy01110
Biosynthesis of secondary metabolites
pyy01120
Microbial metabolism in diverse environments
pyy01200
Carbon metabolism
pyy01210
2-Oxocarboxylic acid metabolism
Module
pyy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RAH42_08750 (nifJ)
00020 Citrate cycle (TCA cycle)
RAH42_08750 (nifJ)
00620 Pyruvate metabolism
RAH42_08750 (nifJ)
00650 Butanoate metabolism
RAH42_08750 (nifJ)
Enzymes [BR:
pyy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
RAH42_08750 (nifJ)
BRITE hierarchy
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4
TPP_enzyme_C
Fer4_6
Fer4_21
Fer4_16
Fer4_8
Fer4_9
Fer4_2
Fer4_10
Fer4_22
Fer4_17
Fer4_4
Peptidase_C25
DUF5856
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
WOL39238
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All DBs
Position
complement(1855967..1859533)
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AA seq
1188 aa
AA seq
DB search
MAKRWKTMDGNMAAAHVSYAFTEVAAIYPITPSSPMAEDCDEWAAQGRKNIFGRVVEISE
MQSEAGASGAVHGSLSAGSLTTTFTASQGLLLMIPNMYKIAGERLPAVFDVSARALATHA
LSIFGDHGDVMACRGTGFAMLASSSVQETMDLTAVSHLTAIKARVPFLNFFDGFRTSHEV
QKIEVLDYDDLAKLVDYDAIAEFKADSLNPEHPYTKGTAQNPDIFFQAREACNRFYDELP
ETVAQYMEQISALTGREYHPFNYYGDPEAERVIVCMGSACQAAEETVDYLMARGEKVGLV
IVHLYRPFSPKYFFRGLPATVKKIAVLDRCKEPGALGEPLYQDVCALFEEYAEAERPLVV
GGRYGLGSKDTTPTQIKAVFDNLKNYKPVNHFTVGINDDVTYHSLPLGETVNAAPEGTIR
CKFWGLGSDGTVGANKNAIKIIGDNTDLYAQGYFSYDSKKSGGITVSHLRFGKKPIKSTY
LIENADFVACHKQEYLHQYDVTAGLKKGGVFLLNTQWTGMDALEANVPAKVKRYLAKNDI
QFYVIDGTDIAQKIGLGNRTNMVMMSAFFKLANVIPMEDAVKYMKDAIQKSYGRKGEDII
NMNNAAVDQGYGALKKIDIPAAWAEAADAPKTEAAGCCEERPDFIRDIVDPINAQEGDKL
PVSAFVGIEDGRFPNGTSAFEKRGVAVFVPEWNKDKCIQCNQCSMVCPHATIRPVLLDED
EAAHKPAGFETLPVKAPKELAGLQFRIQVSPLDCLGCGNCADICPVKALEMKPLASQMAQ
AENWHFGIDHVSDKSDRVNTHNMKNSQFATPYFEFSGACAGCGETPYAKLVTQLFGDRMM
IANATGCSSIWGASAPSMPYTTNALGQGPAWANSLFEDNAEYGYGMAMSVKNSRNDLTAN
VEALLASDTLPEEVRKALQGWYDVRNDAAGSKAAAEAVYEVLDCDLGDEELNAKLARVGD
LADYLVKKSIWIFGGDGWAYDIGFGGLDHVLASGENVNVLVFDTEVYSNTGGQSSKSTPT
SAVAKFAAAGKKVAKKDLGRIAMTYGYVYVAQCAMGADKNQLVKVLSEAEAYDGPSLIIC
YAPCINHGLRAGMGKSQEQEKKAVEAGYWHLYHYNPELEEQGKNPFVLDSKEPKASFRDF
LMSESRYTSLAKTNPEMAEQLYAKAERDAKRRYCVYKSLAEAKPLEAE
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgttggaagactatggatggcaatatggccgcagcgcacgtcagttatgcg
ttcactgaggtcgccgcgatttatcccattacgccttcttcgccgatggccgaagactgc
gacgaatgggcggcccaggggagaaagaatatttttggcagggtcgtcgagatctcggaa
atgcagtccgaagcgggcgcgtcaggcgctgtgcacggttctttgagcgccggatccttg
acgacgacttttacggcttcgcagggattgctgttgatgatccccaatatgtataaaatc
gccggcgaacgcctgcctgccgttttcgacgtcagcgcccgtgccctggcgacgcatgcc
ctctcgatctttggcgaccatggcgacgtgatggcttgtcgcggcacaggatttgcgatg
ttggcttcctccagcgtacaggaaaccatggatctgaccgccgtttctcatctgacggcc
atcaaggcgcgcgtgcctttcctgaactttttcgacggcttccgcacttcgcacgaggtc
cagaagatcgaggtgctggactacgacgatctggcgaagctggtcgattatgacgcgatt
gccgagttcaaggccgactctttgaatcccgagcatccttacaccaaggggaccgcgcag
aatccggacattttcttccaggcgcgcgaagcctgcaaccgtttttacgatgagctgccc
gagacggtcgcgcagtacatggagcagatttccgctctgacgggacgcgagtaccatccg
ttcaactactacggcgatcccgaagcggaacgggtgatcgtctgcatggggtccgcctgt
caggcggccgaggaaacggtcgattacctgatggcccgcggcgagaaggttggtctggtc
atcgtccatctgtatcgtccgttcagtcccaaatatttcttcaggggccttccggccact
gtcaaaaagatcgccgtgctcgaccgctgcaaagaaccgggcgcgttgggcgaacctctg
tatcaggacgtttgcgctctgttcgaggaatacgccgaagccgagcgtccgctggtcgtc
ggcggccgttacggcttgggttccaaggacacgacgccgacgcagatcaaggcggtgttc
gacaatctgaagaactacaagccggtcaatcatttcacggtcggcatcaacgacgacgtg
acctatcattcgctgcctctgggcgagacggtcaatgccgctccggaaggaacgatccgc
tgcaagttctggggcctcggttccgacggcacggtcggcgccaacaagaacgccatcaag
atcatcggcgacaacaccgatctctatgcccagggctatttctcttacgactccaagaag
tcgggcggcatcaccgtttcgcacctccgcttcggcaaaaagcccatcaagtcgacctat
ctcatcgagaacgccgactttgtggcctgccacaagcaggagtatctgcaccagtatgat
gtgactgccggcttgaagaagggcggcgtgttccttctgaatacgcagtggaccggcatg
gatgccctcgaagccaatgtcccggccaaggtcaagcgttatctggccaagaacgacatt
cagttctacgtgatcgacggtacggacatcgctcagaaaatcggcctgggcaaccgcacc
aacatggtcatgatgtcggccttcttcaagctggccaacgtcattcccatggaagacgcc
gtcaagtacatgaaagacgccattcagaagtcctacggccgcaaaggcgaagatattatc
aacatgaacaatgcggcggtcgatcagggctacggcgctctgaagaagatcgatatcccc
gcggcctgggccgaggcggccgacgctcccaagaccgaagctgccggttgctgcgaagag
cgtcctgatttcatcagggatatcgtcgatccgattaacgctcaggaaggcgacaaactg
cccgtcagcgcttttgtcggcatcgaggacggacgcttccccaacggcacttccgctttc
gagaagcgcggcgttgccgttttcgttcccgagtggaacaaggacaagtgcatccagtgc
aaccagtgctcgatggtgtgcccgcacgcgaccattcgccccgtgctgctcgacgaggac
gaagccgctcacaagccggccggtttcgagacgctgccggtgaaggcgcccaaggaactt
gccggccttcaattccgcattcaggtcagcccgcttgactgccttggctgcggcaactgc
gccgatatctgccccgtaaaggctctggagatgaaaccgctggcctctcagatggctcag
gcggagaactggcattttggcatcgaccatgtcagcgacaagtccgaccgcgtcaacact
cacaatatgaagaacagccagttcgccacgccctacttcgagttctcgggggcctgcgcc
ggctgcggcgagacgccgtacgccaagctggtcacgcagcttttcggcgaccgcatgatg
atcgccaacgccacgggctgctcgtccatttggggcgcttccgctcccagcatgccctac
acgaccaacgctcttggacagggccccgcctgggcgaactctctgttcgaggacaatgcc
gaatacggctacggcatggccatgtccgtcaagaacagccgcaacgatctgacggccaat
gtcgaagcgctgcttgcatccgacacgctgcccgaagaagttcgcaaggcgctgcagggt
tggtacgacgttcgcaacgacgcagccggcagcaaggccgcagccgaggcggtgtacgaa
gtgctcgactgcgatctcggcgacgaagaactgaacgccaaattggctcgcgtcggcgac
ctggccgattatctcgtcaagaagtccatctggatcttcggcggcgacggctgggcgtac
gacatcggtttcggcggtctggatcacgtccttgccagcggcgagaacgtcaacgttctt
gtcttcgacaccgaggtgtattccaacacgggcggtcagtcctccaagtccacgcccact
tctgctgtcgccaagtttgccgcggccggcaagaaggttgccaagaaggatcttggacgt
atcgccatgacctatggttacgtctatgtggctcagtgtgccatgggcgccgacaagaac
cagctggtcaaggtgctgagcgaggcagaggcttacgacggtccgtcgctgatcatctgc
tatgcgccctgcatcaaccatggtctgagggccggcatgggcaagagccaggagcaggag
aagaaggccgtggaagccggttactggcatctgtatcactacaaccccgagctcgaagaa
caaggaaagaatcctttcgtcctcgattccaaggagcccaaagcttcgttccgcgacttc
ctgatgagcgagagccgttacacttcgctggccaagacgaatcccgaaatggccgagcag
ctctatgcaaaggccgagcgcgacgccaagagacgttattgcgtgtacaagagtctggct
gaagctaagcctcttgaagcggaatga
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