Pyramidobacter sp. YE332: RAH42_09095
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Entry
RAH42_09095 CDS
T09677
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pyy
Pyramidobacter sp. YE332
Pathway
pyy00470
D-Amino acid metabolism
pyy00550
Peptidoglycan biosynthesis
pyy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RAH42_09095 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RAH42_09095 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pyy01011
]
RAH42_09095 (murD)
Enzymes [BR:
pyy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RAH42_09095 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pyy01011
]
Precursor biosynthesis
Amino acid ligase
RAH42_09095 (murD)
BRITE hierarchy
Motif
Pfam:
Mur_ligase_M
MurD_N
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
3HCDH_N
DAO
NAD_binding_2
Pyr_redox_2
F420_oxidored
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
WOL39297
LinkDB
All DBs
Position
complement(1929312..1930622)
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AA seq
436 aa
AA seq
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MVHKITVVGAGVSGRALALWAASRGAGVFVTDHRAEIPRETQELFSKTRIQWETGGHTPR
CCECDLMVVSSGVSEKSDAVSMARAKNVPVQGELDLLAPFLKGKIIAVTGTNGKTTCTAL
IAHLLQSCGLNAVSVGNIGDPLAAHADRSYDAIVMELSSFQLHWNTQLRPDVAVLTNLAP
DHLDWHGSYESYKSDKCKIFLPRQGECYAVTHDVDAFRVPAGRTVCALGRGNLRIDMDDS
DVLLVDRERRRLLFRKSSLKLLGAHNLENAAMSCAAVALAFRDVDPSAGLASFEVLHHRC
EPVGEHNGVLYIDDSKGTNVAAVIAALHSISGRKLVILGGQGKGERYDELARVVCEETFA
AIVIGSEAEKIFAALRSAGYRHAVRAKDMGEAVKKASELAGPGDKVLLSPACTSWDMYHS
YEERGDHFAQLVRTLF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggttcataagatcaccgtcgtcggcgccggcgtgagcggaagggctctggcgctctgg
gcggccagccgcggcgccggtgttttcgtgaccgatcatcgggcggagatcccccgcgag
acgcaggagcttttcagcaagacgcggatccaatgggaaaccggcggccatacgcccaga
tgctgcgagtgcgacctgatggtcgtgagctcgggcgtctcggaaaaatcggatgcggtg
tcgatggcccgcgcaaaaaacgtgcctgtgcagggagagctcgaccttctcgccccgttc
ctgaaaggaaagatcatcgccgtgacggggacaaacggcaaaacgacctgcacggcgctg
atcgcccacctgttgcaaagttgcggtctgaatgccgtctccgtggggaacatcggcgat
cccctggcggctcatgcggacagaagctatgatgcaatcgtgatggagctgagcagtttt
cagctgcactggaacacgcagctcaggccggacgttgccgtcctgacgaatctggcccct
gaccatcttgattggcatggcagttacgagagctacaaaagcgacaagtgcaagatcttt
ctgccccgtcagggggagtgctacgcggtgacgcatgacgtcgacgcgttccgcgtcccg
gcgggacgcaccgtttgtgcgttgggacgcggcaatttgaggatcgacatggacgacagc
gatgtgcttctggtcgatcgcgaaagacgccgcctgttgttccgtaaaagctcattgaaa
ctgctcggcgcccataatttggaaaatgccgccatgtcttgtgccgccgtagcgcttgcg
tttcgcgacgtcgatccctccgcgggacttgccagtttcgaagtcctccatcatcgctgt
gaaccggtgggcgaacacaatggcgtcctttacatcgacgattccaaagggaccaacgtg
gccgctgtgatcgcggctttgcacagcatcagcggccgcaaactcgtcatccttggcggc
cagggcaagggcgaacgctatgatgaacttgcccgcgtcgtgtgcgaagagacgtttgcc
gcgattgtgatcggttccgaagccgagaaaatttttgcggcgctgcggtctgccggttat
cgacacgccgtgcgggcgaaggatatgggcgaggccgtgaagaaagcctcggaacttgcc
ggtcccggcgataaagtccttctttctcccgcctgcacaagctgggacatgtatcatagt
tatgaagaacggggagatcattttgcccaactcgtcagaacactgttctaa
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