Pyramidobacter sp. YE332: RAH42_09320
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Entry
RAH42_09320 CDS
T09677
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pyy
Pyramidobacter sp. YE332
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyy03400
]
RAH42_09320 (radA)
DNA repair and recombination proteins [BR:
pyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RAH42_09320 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
Zn_ribbon_LapB
Lon_C
ChlI
AAA_22
AAA_16
nSTAND_NTPase5
DUF7125
nSTAND3
AAA_24
AAA
NTPase_1
ABC_tran
NPHP3_N
RecA_N
AAA_5
AAA_14
MCM
AAA_19
NACHT
AAA_30
RsgA_GTPase
NB-ARC
DUF7129
DAP3
Motif
Other DBs
NCBI-ProteinID:
WOL39341
LinkDB
All DBs
Position
complement(1976801..1978156)
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AA seq
451 aa
AA seq
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MAKKDGKRYCCIECGYVSLVPSGKCPRCGAWGTLEEEIPVAPSMAAAGTAKILTPVDIST
LEPPQRLASGFGELDRVLGGGWVPGGVVLLGGQPGIGKSTLLLQVCGHVSSTGRRVLYIS
GEESPSQLGLRAKRLRILHDGLDVCCHTVVDDALALAKDHSLIVVDSVQAMRTSQAEGWP
GTPTQVRATAQVCVNYAKEHGIPMVLVGHITKEGRIAGPMLLEHMVDAVIMFADDNSSVY
RTLRASKNRYGGTDEMGIFEMRSDGLAEVPDPSYLYWNRSDGAVSGVVMTVIMEGSRPLV
AEIQTLASQSSFAYPKRAGIGLGANKIGMLLAVLQSRCALPSLRDDIYCNVAGGLEIHDP
GADLALAASMASALTGRNVLPECCLIGEVGLAGEVRPVSGLAQRLREAARLGFKRAVVSS
REEKPQLDAEIEMIRVLSVSEALTRASVVEP
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaagacggcaagcggtactgctgcatcgaatgcggctacgtttccctggtc
ccttcgggcaagtgcccgcgctgcggcgcctggggcaccctggaagaggagatccccgtc
gcgcccagcatggcggccgccggcacggcgaagatcctcacgccggtggacatcagcacg
ctggaaccgcctcagcggctcgcctccggtttcggcgagctggaccgcgtgctgggcggc
ggctgggtgcccggcggcgtcgtgctgctgggcggccagcccggcatcggcaaatcgacg
ctgctgctgcaagtctgcggtcacgtttcgtcgacggggcggcgcgtgctctatatctcc
ggcgaagagtcgccgtcgcagctggggctgcgcgccaaacggctgaggatccttcacgac
gggctcgatgtctgctgtcacacggtcgtcgacgacgccctggcgctggcgaaggatcac
agcctgatcgtcgtggacagcgtgcaggccatgcgcacttcgcaggccgaaggctggccg
ggcacgcccacgcaggtgcgcgccacggcgcaggtctgcgtcaactatgccaaggaacac
ggcatacccatggtgctcgtcggacacatcaccaaggaagggcgcatcgccggccccatg
ctgctggagcacatggtggacgcggtgatcatgttcgccgacgacaattcgtcggtgtac
cgcacgctgcgggccagcaagaaccgttacggcggtaccgacgagatgggcattttcgag
atgcgcagcgatggcttggcggaagtgcccgatcccagctatctctattggaaccgttcc
gacggcgccgtgtcgggcgtcgtcatgaccgtgatcatggaaggctcgcgtccgctggtg
gccgaaattcaaacgctggcgagccaaagcagtttcgcctaccccaagcgcgccggcatc
ggcctcggcgccaacaagatcggcatgctgttggcggtgctgcagagccgctgtgccttg
ccctcgctgcgcgacgacatttactgcaacgtcgccggcgggctggagatccacgatccc
ggcgccgatctggcgctggcggcgtcgatggcttcggcgctgacggggcggaacgtcctg
cccgagtgctgcctgatcggcgaggtcggactggccggcgaggtccgtcccgtttccggt
ctggcgcagagattgcgcgaggcggcgcggctgggcttcaaacgcgccgtggtcagttcc
cgcgaggagaagccgcagctcgacgccgaaatcgagatgatccgcgtgctttcggtcagc
gaagcgctgacccgcgccagtgtggttgagccatag
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