KEGG   Pyramidobacter sp. YE332: RAH42_09320
Entry
RAH42_09320       CDS       T09677                                 
Symbol
radA
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
pyy  Pyramidobacter sp. YE332
Brite
KEGG Orthology (KO) [BR:pyy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pyy03400]
    RAH42_09320 (radA)
DNA repair and recombination proteins [BR:pyy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     RAH42_09320 (radA)
SSDB
Motif
Pfam: AAA_25 ATPase DnaB_C Lon_C Zn_ribbon_LapB ChlI AAA_22 AAA_16 nSTAND3 AAA_24 AAA NTPase_1 ABC_tran AAA_14 NPHP3_N RecA AAA_5 MCM AAA_19 DUF7125 NACHT AAA_30 RsgA_GTPase DUF7129 DAP3
Other DBs
NCBI-ProteinID: WOL39341
UniProt: A0AAU0KA13
LinkDB
Position
complement(1976801..1978156)
AA seq 451 aa
MAKKDGKRYCCIECGYVSLVPSGKCPRCGAWGTLEEEIPVAPSMAAAGTAKILTPVDIST
LEPPQRLASGFGELDRVLGGGWVPGGVVLLGGQPGIGKSTLLLQVCGHVSSTGRRVLYIS
GEESPSQLGLRAKRLRILHDGLDVCCHTVVDDALALAKDHSLIVVDSVQAMRTSQAEGWP
GTPTQVRATAQVCVNYAKEHGIPMVLVGHITKEGRIAGPMLLEHMVDAVIMFADDNSSVY
RTLRASKNRYGGTDEMGIFEMRSDGLAEVPDPSYLYWNRSDGAVSGVVMTVIMEGSRPLV
AEIQTLASQSSFAYPKRAGIGLGANKIGMLLAVLQSRCALPSLRDDIYCNVAGGLEIHDP
GADLALAASMASALTGRNVLPECCLIGEVGLAGEVRPVSGLAQRLREAARLGFKRAVVSS
REEKPQLDAEIEMIRVLSVSEALTRASVVEP
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggcgaaaaaagacggcaagcggtactgctgcatcgaatgcggctacgtttccctggtc
ccttcgggcaagtgcccgcgctgcggcgcctggggcaccctggaagaggagatccccgtc
gcgcccagcatggcggccgccggcacggcgaagatcctcacgccggtggacatcagcacg
ctggaaccgcctcagcggctcgcctccggtttcggcgagctggaccgcgtgctgggcggc
ggctgggtgcccggcggcgtcgtgctgctgggcggccagcccggcatcggcaaatcgacg
ctgctgctgcaagtctgcggtcacgtttcgtcgacggggcggcgcgtgctctatatctcc
ggcgaagagtcgccgtcgcagctggggctgcgcgccaaacggctgaggatccttcacgac
gggctcgatgtctgctgtcacacggtcgtcgacgacgccctggcgctggcgaaggatcac
agcctgatcgtcgtggacagcgtgcaggccatgcgcacttcgcaggccgaaggctggccg
ggcacgcccacgcaggtgcgcgccacggcgcaggtctgcgtcaactatgccaaggaacac
ggcatacccatggtgctcgtcggacacatcaccaaggaagggcgcatcgccggccccatg
ctgctggagcacatggtggacgcggtgatcatgttcgccgacgacaattcgtcggtgtac
cgcacgctgcgggccagcaagaaccgttacggcggtaccgacgagatgggcattttcgag
atgcgcagcgatggcttggcggaagtgcccgatcccagctatctctattggaaccgttcc
gacggcgccgtgtcgggcgtcgtcatgaccgtgatcatggaaggctcgcgtccgctggtg
gccgaaattcaaacgctggcgagccaaagcagtttcgcctaccccaagcgcgccggcatc
ggcctcggcgccaacaagatcggcatgctgttggcggtgctgcagagccgctgtgccttg
ccctcgctgcgcgacgacatttactgcaacgtcgccggcgggctggagatccacgatccc
ggcgccgatctggcgctggcggcgtcgatggcttcggcgctgacggggcggaacgtcctg
cccgagtgctgcctgatcggcgaggtcggactggccggcgaggtccgtcccgtttccggt
ctggcgcagagattgcgcgaggcggcgcggctgggcttcaaacgcgccgtggtcagttcc
cgcgaggagaagccgcagctcgacgccgaaatcgagatgatccgcgtgctttcggtcagc
gaagcgctgacccgcgccagtgtggttgagccatag

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