Pyramidobacter sp. YE332: RAH42_09530
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Entry
RAH42_09530 CDS
T09677
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pyy
Pyramidobacter sp. YE332
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyy03016
]
RAH42_09530 (truB)
Enzymes [BR:
pyy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RAH42_09530 (truB)
Transfer RNA biogenesis [BR:
pyy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RAH42_09530 (truB)
Prokaryotic type
RAH42_09530 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WOL39380
LinkDB
All DBs
Position
complement(2018670..2019596)
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AA seq
308 aa
AA seq
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MYNGILVLDKIYGAPSRGCVTAVSKALGGRKQKIGHAGTLDTSASGTLVLLAGSATRLSE
AVMNLPKSYLARVTFGWETSTDDATGEPLSEPAPAAYDEPALLGALPAFQGVRLQTPPRV
SAVKVDGARAHKLARSGREPDIRPRPVNVTSIRYLGRDETGAARLLVRCHRGTYVRSLAR
DLGRALGAGAHLSGLRRLNVGCYRAEEALPYNPQAPASEAELAARIQSVESLASQYYSYD
ANAFCEKRLSNGLGVYVSFMRFRNPGVVPVDEGVMVVGKEHLCLGALRVENGRAVICPQA
NIPTAVRL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgtataacgggatcctcgttctcgacaaaatttacggcgcgcccagccgcggctgcgtt
accgcggtgtcgaaggcgctcggcggacggaaacagaaaatcggacacgccggcacgctg
gacacctcggcgtcgggaacgcttgtgttgctggccgggagcgccacgcgcctgagcgaa
gcagtgatgaatctgccgaaaagttatctggcgcgcgtgacgttcggctgggagaccagt
accgacgacgcgaccggcgagccgctgagcgagccggcgccggccgcttacgacgagccg
gcgctgctgggcgcgctgccggcttttcagggcgtgcgcctgcaaacgccgccgcgcgtc
tccgcggtgaaggtggacggcgcgcgcgcccacaagctggcgcgttccggacgggaaccg
gatatccggccccggcccgtgaacgtcacttcgatccgctatctcggccgcgacgaaacg
ggcgcagcccgtctgctggtgcgctgccaccgcggcacgtacgtgcgcagcctggcgcgc
gacctcggccgcgcgctgggagcgggcgcgcatctgtcgggactgcgccgcctgaacgtg
ggctgttaccgcgccgaagaggcgctgccctacaatccgcaggctcccgcgagcgaagcg
gagctcgccgcccgcatccagtccgtcgaatcgctggcttcccagtattacagttacgac
gccaacgctttctgcgagaagcggctgagcaacggcctcggcgtgtacgtgagtttcatg
cggttccgcaatcccggcgtggtgccggtggacgagggcgtgatggtcgtgggcaaagag
catctctgcctcggcgcgctgagagtcgaaaacggccgcgccgtaatctgcccgcaggcc
aacatccccacggcggtgcgcctgtga
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