Pyramidobacter sp. YE332: RAH42_10410
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Entry
RAH42_10410 CDS
T09677
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pyy
Pyramidobacter sp. YE332
Pathway
pyy00860
Porphyrin metabolism
pyy01100
Metabolic pathways
pyy01110
Biosynthesis of secondary metabolites
pyy01120
Microbial metabolism in diverse environments
pyy01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RAH42_10410 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pyy04147
]
RAH42_10410 (hemB)
Enzymes [BR:
pyy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
RAH42_10410 (hemB)
Exosome [BR:
pyy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RAH42_10410 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
TMEM215
Motif
Other DBs
NCBI-ProteinID:
WOL39545
LinkDB
All DBs
Position
complement(2208856..2209836)
Genome browser
AA seq
326 aa
AA seq
DB search
MIVRPRRLRQTPALRNLVAETRLSADMFIYPVFIREGCGIVEDIPSLPGQKRYSPDTFPL
VLEEMARCGVKAVLLFGLPERKDETGTGAWDENGVIQQALRVGKKAFPEITFIGDVCMCE
YTSHGHCGILHGEKVDNDETLEYLTRIAVSQAAAGADVVAPSDMMDGHVAALRAGLDAAG
MKDKIIFSYAVKYASAFYGPFRDAAGSAPAFGDRRGYQMDPRNAREGLKEAELDIEEGAD
MIMVKPGLLYLDVLRAVKEISPVPVGSYCVSGEYAMIKAAAAKGWLDESRAVAEAAYSLA
RAGADVIVTYSALDLARWLKEGRVAF
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcagaccgagaagactgcgccagaccccggcgctccgcaacctcgtcgcggaa
acgcgcctcagcgccgatatgttcatctaccccgtgttcatccgcgaaggctgcggcatc
gtcgaagacatcccctcgctgcccgggcagaaacgttacagccccgacaccttcccgctc
gtcctcgaagagatggcgcgctgcggcgtcaaagccgtgctgctcttcggcctgcccgag
cgcaaggacgaaaccggtaccggcgcgtgggacgagaacggcgtcatccagcaggcgctg
cgcgtcggcaaaaaagcttttcccgagatcaccttcatcggcgacgtgtgcatgtgcgaa
tatacctcgcacggccactgcggcatccttcacggcgaaaaggtggacaacgacgagacg
ctcgagtacctgacgcgcatcgccgtttcccaggccgcggcgggggccgacgtcgtcgct
ccctccgacatgatggacggccacgtcgccgccctgcgcgccggactggacgccgccggc
atgaaggacaagatcatcttctcttacgccgtcaaatacgcctcggcgttctacggcccc
ttccgcgacgccgccggctccgcgccggccttcggcgaccgccggggctaccagatggat
ccgcgcaacgcgcgcgagggactcaaggaagcagaactcgacatcgaagaaggcgccgac
atgatcatggtcaaacccggcctgctctacctggacgtgctgcgcgccgtcaaagagatc
agccccgtgcccgtcggttcctactgcgtcagcggcgagtacgccatgatcaaggccgcg
gccgccaaaggctggctcgacgaatcgcgcgccgtcgccgaagcggcgtacagcctggcg
cgcgccggagccgacgtgatcgtcacctactcggccctcgacctggcccgctggctcaaa
gaagggcgcgtcgccttttag
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