Pyramidobacter sp. YE332: RAH42_10500
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Entry
RAH42_10500 CDS
T09677
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pyy
Pyramidobacter sp. YE332
Pathway
pyy00061
Fatty acid biosynthesis
pyy00071
Fatty acid degradation
pyy01100
Metabolic pathways
pyy01212
Fatty acid metabolism
pyy02024
Quorum sensing
pyy04146
Peroxisome
Module
pyy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RAH42_10500
00071 Fatty acid degradation
RAH42_10500
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RAH42_10500
09145 Cellular community - prokaryotes
02024 Quorum sensing
RAH42_10500
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pyy01004
]
RAH42_10500
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pyy04147
]
RAH42_10500
Enzymes [BR:
pyy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RAH42_10500
Lipid biosynthesis proteins [BR:
pyy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RAH42_10500
Exosome [BR:
pyy04147
]
Exosomal proteins
Exosomal proteins of breast milk
RAH42_10500
Exosomal proteins of breast cancer cells
RAH42_10500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
PaRep2a
GH3
Motif
Other DBs
NCBI-ProteinID:
WOL39563
UniProt:
A0AAU0K9Q2
LinkDB
All DBs
Position
2225036..2226508
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AA seq
490 aa
AA seq
DB search
MERLEDLLLESLRKRAAADVFWWDGEWLKGQALLDAVAAEREALTAAGFKEGQRLMTLLP
NCPALLTLTLAVWTLKGTLVPLNMRAGTDNLLPTIDLVQPFAIAVARGDAKAAAGVLRYP
VVEIEPTTGTLDKFRGVERKTTTSDWAVFFTTSGTTGLPKAVPLSHENFVDNVRSICKHF
PIYPSDTIIWALPNFHSFGLTLSMLLPQYAGAKVAAVPAFMPPLKTLEAIRDAGCTVLFL
VPAMLEFLKRSAAHNPIEINSVRAVITGGDRLNTMLDQASMELFGHPILEGYGTTECSPV
VTFNNDEKTRKLGTIGPVLPGYEWKVCDQQGNALPPETPGVLKLRGKSVFHGYYEAPEVT
AERLAPDGWYDTGDVVKYDADGYITVLDRLTDIIIVGGFNVYPQEVERILNVHPSIAQAA
VVAMHHLVNGEIPRAFVVLKEGASVTDRDIIEYCKGKLANYKIPRKVDFVESLPVSPSGK
ILRRKLRELE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtcttgaagatctcctgctggagagtttgagaaaacgcgccgccgcggatgtg
ttttggtgggacggggagtggctgaaggggcaggcgctgctggacgccgtcgccgcggaa
cgcgaagcgctgacggcggccggtttcaaagaagggcagcggctcatgacgctgctgccc
aactgcccggcgctgctgacgttgactcttgccgtctggaccctgaaaggcacgctggtc
ccgctgaacatgcgcgccggcaccgacaatctgctgcccaccatcgacctcgtgcagccg
ttcgcgatcgcggtcgcgcgcggcgacgccaaagccgcagcgggcgtgctgcgctacccc
gtcgtggagatcgagccgacgacaggcacgcttgacaaattccgcggcgtggaacgcaaa
acgacgacgtccgactgggccgtgttcttcacgacctcgggcacgaccggcctgcccaag
gccgtgccgctgagccacgaaaatttcgtcgacaacgtgcgctcgatctgcaaacatttc
ccgatttatccgagcgacacgatcatctgggcgctgccgaacttccactccttcggcctg
acgctctccatgctgctgccccaatacgccggcgcgaaagtcgccgccgtgcccgcattc
atgccgccgctgaaaacgctcgaggcgatccgcgacgccggctgtaccgtgctgttcctc
gtgcccgccatgctcgagttcctgaagcgttcggccgcacacaatcccatcgagatcaac
tcggtccgcgccgtcattaccggcggcgaccggctcaatacgatgctcgaccaggccagc
atggagctgttcggccatcccattctcgaaggctacggcacgaccgagtgctcacccgtc
gtcaccttcaacaacgacgaaaagacgcgcaagctcggcaccatcggtcccgtcctgccc
ggctacgagtggaaagtctgcgatcagcagggcaacgcgctgccgccggaaacgcccggc
gtgctcaaactgcgcggcaagtccgtgttccacggctactacgaagcgcccgaagtcacc
gccgagcgcctcgcccccgacggctggtacgacaccggcgacgtcgtcaaatacgacgcg
gacggctacatcaccgtgctcgaccgcctcaccgacatcatcatcgtcggcggtttcaac
gtctatccccaggaagtggaacgcatcctcaacgtccatccgtcgatcgcccaggcggcc
gtcgtggccatgcaccacctcgtcaacggcgagatcccgcgcgctttcgtcgtgctcaag
gaaggcgcttcggtcaccgaccgcgacatcatcgaatactgcaagggcaaactcgccaac
tacaagatcccgcgcaaggtcgatttcgtcgagagcctgcccgtgtcgccttcgggcaag
atcctgcgccgcaagctgagagagcttgagtga
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