Pyramidobacter sp. YE332: RAH42_11165
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Entry
RAH42_11165 CDS
T09677
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pyy
Pyramidobacter sp. YE332
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyy03019
]
RAH42_11165
03009 Ribosome biogenesis [BR:
pyy03009
]
RAH42_11165
Messenger RNA biogenesis [BR:
pyy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RAH42_11165
Ribosome biogenesis [BR:
pyy03009
]
Prokaryotic type
rRNA processing factors
RAH42_11165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PilJ
Motif
Other DBs
NCBI-ProteinID:
WOL39682
UniProt:
A0AAU0KA61
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Position
complement(2360940..2362442)
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AA seq
500 aa
AA seq
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MNQPDILILANTIDPEEARVAIVENGRLSELFVERMWECQKSGEIYKARVESVLPGMNAA
FVGLGDGRNGFLYLNDARGVKVQQNGEVLVQVVKTARKNKGARVTARISLPGRYLVLVPG
GRDVGVSKRIVKEEERARLKETIRALDTAGYGVILRTASEGVDADALADDFERLKTLWHD
IEDNAAKQTAPCLLYKDMGLVGRVLRDELSSEVSQIVVDNQEEYDRVADYLQRYSAAEKT
PALGFHRSNIPLFEYYDVEKEIDALLDNKVWLKSGAYLVVDQTEALTVIDVNTGKYTGGH
NLRETVLATNLEAAEEIAWQLKLRAIGGIVVVDFIDMEPEGDRKALLAKLDEVFAADRCR
VRVYGISQLGLVEMTRKRARADLRSVLTRPCPLCGSGSRVLKEDSLALMLKRFIRKVFLS
GRAEAVLVDVNESVAAYAAQVYLSLWEETFGRKIFLRGRPGMPLEKFRLDLQGSLSSVES
RVELMRSRGDTSVVYRTTDP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccggatatactcatcctggcgaacaccatcgacccggaagaagcccgcgtc
gcgatcgtggaaaacggtcgtttgagcgagctcttcgtcgaacggatgtgggaatgccag
aagagcggggaaatatacaaagcgcgcgtggaaagcgttctgcccggcatgaacgccgcc
ttcgtcggcctcggcgacgggcggaacggcttcctttatctgaacgacgcgcgcggcgtg
aaagtgcagcaaaacggcgaagtgctggtgcaggttgtcaagacggcgcgcaagaacaaa
ggggcccgcgtgaccgcgcgcatttcgctgcccgggcgctatctcgtgctcgtgcccggc
ggccgcgacgtgggcgtgtccaaacgtatcgtcaaggaagaggagcgggcccgtctcaag
gagacgatccgcgccttggacacggccggttacggcgtgatcctgcgcacggcttcggaa
ggcgtggacgccgacgctctggccgacgatttcgagcggctcaagacgctctggcacgac
atcgaggacaacgccgccaagcagacggcgccctgcctgctgtacaaggacatggggctg
gtcgggcgcgtgctgcgtgacgagctgagctccgaagtgtcgcagatcgtcgtcgacaat
caggaggagtacgaccgcgtcgccgattacctgcagcgctacagcgccgcggagaaaacg
ccggcgctgggcttccaccgcagcaacatcccgctgttcgagtactacgacgtcgaaaag
gaaatcgacgcgctgctggacaataaagtctggctcaagtccggcgcctatctcgtcgtc
gatcagacggaagcgttgacggtgatcgacgtgaacacgggcaagtacaccggcgggcac
aatttgcgcgagacggtgctggccaccaacctcgaagcggccgaagagatcgcctggcag
ctgaagctgcgcgccatcggcggcatcgtcgtcgtcgacttcatcgacatggagccggaa
ggggacagaaaagcgctgctggcgaagctggacgaagttttcgcggcggatcgctgccgc
gtgcgcgtctacgggatctcgcagcttggcctggtggagatgacgcgcaagcgcgcgcgg
gccgatctgagatcggtgctgacgcgtccctgcccgctctgcggctccggctcgcgggtg
ctgaaggaggattcgctggcgctgatgctgaagcgcttcatccgcaaggtcttcctttcc
ggccgcgccgaggccgtgctcgtggacgtcaacgaatcggtggcggcttacgcggcgcag
gtctatctgagtctgtgggaggagacgttcggccggaaaattttcctgcgcgggcggccg
ggcatgccgctggagaaattccgtctcgacctgcagggctcgctgagcagcgtagaatcg
cgcgtcgaactgatgcgcagcagaggagataccagcgttgtttatcgaacgactgaccct
taa
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