Pyramidobacter sp. YE332: RAH42_11200
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Entry
RAH42_11200 CDS
T09677
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pyy
Pyramidobacter sp. YE332
Pathway
pyy00550
Peptidoglycan biosynthesis
pyy01100
Metabolic pathways
pyy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RAH42_11200 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RAH42_11200 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pyy01011
]
RAH42_11200 (mrdA)
Enzymes [BR:
pyy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RAH42_11200 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pyy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RAH42_11200 (mrdA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
PQQ
Motif
Other DBs
NCBI-ProteinID:
WOL39689
UniProt:
A0AAU0KA70
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Position
complement(2368534..2370258)
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AA seq
574 aa
AA seq
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MNFWRAVVAGSFVVLAVALALFQVLWSDRYVGLALKNRLRLIRMPPARGQIYDRKGLPLA
LNVMTFDIMGYPLDLQRDEVKQKLLGALQRARLPHDPEKLEQRVKNLYWAPYRAISLVSN
LTLLQMTSLMEDPEFPEVLFPLPVWRRTYPAGPLASHVVGYVGEISEQELRSVETDENKS
YIGGDVIGKSGVEKYYEDVLRGSIGERAVEVDARGRQRRTLNETMPGIGQDLTLTIDLSA
QSYASDLMKDYNGVMVALDVNNGEVIVMWSNPSYDPNPLAWGVSGTEWAGLNLDSSRPLL
NRAISGQYSPGSIFKAVTGYAALESGVVDKNTSVHCSGVFRLGGNLYHCWRRGGHGRETF
VRALRDSCDVYFYETSQMVGVKRYDDVGERFALGRPLGIDLPGEAAGILPGPEWKKKTMR
QSWFKGDSVNMSIGQGFVLLTPLQMASVYATIANGGVFYRPHVLKTAEVEGQPTGLRQEY
LQLVKAGLRAVVAKGGTGHRAAVSGVEIAGKTGTVQHDHGKDHAVFAGYAPASKPRYAVV
CFIEGGESGGRVAGPLVGQLLSFLLNENGSAKEK
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttctggcgtgccgtcgtggccggatcctttgtggttttggcggtcgcgctggcg
ctttttcaggtgctctggtccgaccgctacgtagggctggcgctgaagaaccgccttcgg
ctgatccgcatgccgccggctcgcgggcagatctatgaccgcaagggactgccgctggct
ctgaacgtgatgacgttcgatatcatgggctatccgctggacctgcagcgcgacgaggtc
aaacaaaaactgcttggcgctttacagcgtgcccgcctgcctcacgatccggagaagctc
gaacagcgcgtcaaaaatctttactgggctccgtatcgggctatttcgctggtctcgaat
ctgacgctgctgcagatgaccagcctgatggaagatcctgaatttcccgaagtgctgttc
ccgctgccggtgtggcgccgcacttatcccgccggtcccttggcgtcccacgtggtggga
tacgtgggcgaaatttccgaacaggaactgcgcagcgttgaaactgatgaaaacaaaagc
tacatcggcggcgacgtgatcggtaaatccggcgtagagaaatattatgaagacgttttg
cgcggctccatcggcgaacgggcggtagaagtggacgcccgcggccgtcagcgccgcacg
ctgaatgaaacgatgccgggcatcggacaggatctgacgctgacgatcgatctgagcgca
cagagttatgcctcggatctcatgaaggattacaatggcgtgatggtggctctcgacgtg
aacaacggcgaagtgatcgtgatgtggtcgaatccttcttatgatccgaatccgctggct
tggggggtgtccgggactgaatgggccggcctgaatctcgacagctcccgccccttgttg
aatcgggccatcagcgggcagtactcgcccggttccatatttaaagcggtgaccggctac
gcggcgcttgaatccggtgtggtagacaaaaacacgtcggttcactgctccggagttttt
cgcctgggcgggaatttgtatcattgctggcggcgcggcggacacggtcgggagactttc
gtgcgggcgctgcgcgattcgtgcgacgtctatttttacgagaccagccagatggtcggc
gtgaaaaggtacgatgacgtgggagaacgcttcgctctcggccgcccgctgggcatcgat
cttcccggcgaagccgcgggcatcctgccggggcccgagtggaagaaaaaaacgatgcgc
cagagctggttcaagggcgattcggtcaacatgtcgatcgggcagggctttgtgctgctc
acgccgctgcagatggccagcgtctacgcgactatcgccaacggcggcgttttctatcgt
ccgcacgtgttgaaaacggcggaagtagagggacaacctaccgggcttcgtcaggagtat
ctgcaactggtcaaggccgggctgcgggcggtggttgccaaaggcggcaccggtcatcgc
gccgcagtgtccggtgtggaaattgcgggcaaaaccggtacggtccagcacgatcacggc
aaggatcacgccgtgtttgccggttacgcaccggcgtcaaagcctcgttatgccgtcgtc
tgcttcatcgaaggcggcgagagcggcggccgcgtggccggccctttggttgggcagctg
ctgagctttttgctgaatgaaaatggcagcgcgaaagaaaaataa
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