KEGG   Pyramidobacter sp. YE332: RAH42_11240
Entry
RAH42_11240       CDS       T09677                                 
Name
(GenBank) DHH family phosphoesterase
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pyy  Pyramidobacter sp. YE332
Pathway
pyy03410  Base excision repair
pyy03430  Mismatch repair
pyy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pyy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RAH42_11240
   03430 Mismatch repair
    RAH42_11240
   03440 Homologous recombination
    RAH42_11240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pyy03400]
    RAH42_11240
DNA repair and recombination proteins [BR:pyy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     RAH42_11240
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     RAH42_11240
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      RAH42_11240
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1
Other DBs
NCBI-ProteinID: WOL39697
LinkDB
Position
complement(2376997..2378655)
AA seq 552 aa
MCSFNDLDIYQPGEKTRDLARRLECSELAAAVLDSRAAGEEQFRQLLNVPDLRRQLDELF
LGRAAPAARELWLKAVPGKRVFVYGDYDVDGVSSTVIALELAQQSGASEAVYYIPDRRSE
GYGLHPANMRRIIADGFDTLIVTDCGSKDVEAVEMARTAGMNVLIFDHHAVEGDIVRLES
LVNPQMDGDAEAKRLCATAVLWCWAWQAHILPESRLAGMLQLAALATVSDCMPLGPLNRS
LTREGIKMMRRAPRRGLRELLRSLCPNEPDSMIDENRLSMKVIPCLNAAGRVQVADVAVN
VLSGLGTPLELQRSVDQLLDLNRRRRDISAAICSSINAGLEQGERSQVLFNGSWPVGILS
AIASRLCSEHNKAFALAAPSGGGIRGTLRVPSGANAVELLKSLDDLLDAWGGHKSAAGFS
VDQLKWPRLERELNSLLQNIKVEKTPEEVIEFEPDRITGAAWDEVQRIGPFGNGNPLPAF
FVPLDSRTTYAPLGKRGLHTRVLFGGNALIAFNGAEQIERTEDIRGWLYRPRPNLWQGRV
SLQYIVEGIVVA
NT seq 1659 nt   +upstreamnt  +downstreamnt
gtgtgttcgttcaatgatttggatatttaccagcccggcgagaagacccgcgatctcgcc
cgccggctggaatgttccgagctggccgccgcggtgctggacagccgcgcggcgggcgag
gaacaattccggcagctgctgaacgtccccgatcttcgccggcagttggacgagcttttt
ctcggacgcgcggccccggcggcgcgggagctgtggctgaaggcggtgcccggaaaaaga
gttttcgtttacggagactacgacgtggacggcgtctcgtccacggtgatcgcgcttgaa
ctggcgcagcagagcggcgcgtccgaggcggtctattacatccccgaccgccgttccgaa
ggttacggcctgcatcctgcgaacatgcgccgcatcatcgccgacggtttcgacacgctg
atcgtgacggactgcggttcgaaggacgtggaagccgtagagatggcgcgcaccgccggg
atgaacgtgttgatcttcgaccaccatgccgtggaaggcgacatcgtccggctcgaatca
ttggtcaatccccagatggacggcgacgccgaagccaaacggctttgcgcgacagccgtt
ttgtggtgttgggcctggcaggcgcatattttgcccgaaagccgcctggccggcatgctt
cagctggccgcgctggctacggtgtccgactgcatgccgctggggccgctgaaccgctcg
ctgacgcgcgaaggcatcaagatgatgcgccgcgctccgcgccgcgggctgcgcgaactg
ctccgctccctgtgcccgaacgaacccgactcgatgatcgacgaaaatcgtctgtccatg
aaggtgatcccctgcctcaacgccgccgggcgcgtgcaggtggccgacgtcgcggtcaac
gtgctctccggattgggaacgccgctggaactgcagcgcagcgtcgatcagctgctggat
ctcaaccgccgccgccgcgatatttccgcggcgatctgctcgagcatcaacgccggtctg
gagcagggcgagcggtcgcaggtcctgttcaacggcagctggccggtggggatcttgagc
gcgatcgccagccgtctgtgcagcgaacacaacaaggccttcgcgctggccgcgccgtcg
ggcggcggcatccgcggcaccctgcgcgtgcccagcggcgccaacgcggtggaactgctg
aaaagcctcgacgatctgctcgacgcctggggcgggcacaaaagcgccgcggggttctcc
gtcgatcagctcaagtggccccgcctggagcgggagctgaacagtctgcttcagaatatc
aaagttgaaaaaacgcccgaagaggtgatcgagttcgaacccgatcggatcaccggcgcg
gcatgggacgaggtgcagcgcatcgggccctttggcaacggcaaccctctgccggccttt
ttcgtgccgctggattcccgcacgacatatgcgccgttgggcaagcgcggcctgcatacc
cgcgtgctttttggcggcaacgcgctgatcgccttcaacggcgccgagcagatcgaacgc
acggaagatatccgcggttggctctaccgtccccgtccgaatctctggcaggggcgcgtc
agcctgcagtacatcgttgaaggcattgtcgtggcctga

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