Pseudomonas ogarae SWRI108: HU749_000280
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Entry
HU749_000280 CDS
T07889
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU749_000280 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pza02044
]
HU749_000280 (tssK)
Secretion system [BR:
pza02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU749_000280 (tssK)
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Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QXH94868
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All DBs
Position
complement(61714..63048)
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLAQGKL
AIISARGLLPDGTPFNIPQDDLAPIPLNVDDNLRDGLVYLALPLKRAGARDTVDEGEDLG
AARYVSQVCEVRDDNAPFENRAPVALGSRALRLLTEQDGIGDYAAIGVVRIKEKRADRAL
VLDDAYIPPLLDVIASKPLAAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIQHLSQLSPLHPERFYSELVSLAGEFSTFTASGRRPQQYPPYQHDDLTLSYTP
VMQALREALSMLIDSKATPIPIVEKAYGIHVAMLADKTLLDSASFILVVRADVPAETLRG
RFGQQSKVGSVEHIRDLVNLQLPGIGLLPLPVAPRQLPYHAGSTYYELDRGSDHWQQLSN
SGGFAFHIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggaacaatcgcgtggtctggtcggaaggcatgttcattggaacgcagcacttc
caacagcatgaccgttacctggaaaacctcatcgacgcacgcagccgcccgttgtcggcc
ggcgcctggggtttttccgaattgctgatcgaccagggcctgctggcccagggcaagctg
gcaatcatctcggcgcgcggcctgctgccggacggtacgcccttcaacattccccaggac
gacctggcgccgatcccattgaacgtcgacgacaacctgcgcgatggcctggtgtacctg
gccctgccgctcaagcgcgccggcgcccgggacaccgtggacgaaggtgaagacctcggc
gctgcgcgttatgtgagccaagtgtgcgaagtgcgcgacgacaacgcaccgttcgagaat
cgcgcaccggtggccctcggctcgcgggcgctgcggttgctgaccgagcaggatggcatc
ggcgactacgccgccatcggcgtggtgcgcatcaaggaaaaacgcgccgaccgtgcattg
gtgctcgacgacgcctacatcccgccgctgctggatgtgatcgcctccaaaccgctggcg
gcgttccgcagtgaactgctgggcctgctgcatcaacgcggcgaagccctggccgggcgg
gtggtggcgtccggcgccggtggcgcctcggaaattgccgatttcatgctgttgcaactg
gtcaaccgcgcccagccgctgatccagcacctgagccagttgagcccgctgcatcccgag
cgtttctacagcgagctggtgagcctggccggggagttctccacgttcaccgcgtccggg
cgacgaccgcagcaatacccgccttaccagcacgatgacctgacgctcagctacacgcct
gtgatgcaggccctgcgcgaagccttgtcgatgctgatcgacagcaaggcgacaccgatt
ccgattgtcgagaaagcctacggcatccacgtggcgatgctggccgacaagaccctgctc
gacagtgccagtttcatcctggtggtgcgcgccgacgtgccggccgagaccctgcgcggc
cgcttcggccagcagagcaaggtcggttcggtggagcacatccgcgacctggtcaacctg
caactgccgggcatcggcctgctgccgttgccagtggcgccgcggcagctgccgtaccac
gccggctccacttactacgaactcgaccggggcagcgatcactggcaacagttgagcaac
tccggcgggtttgcgttccacatcgccggccagttcccagggctgaacctggccttctgg
gcgatccgaggataa
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