Pseudomonas ogarae SWRI108: HU749_000340
Help
Entry
HU749_000340 CDS
T07889
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza02025
Biofilm formation - Pseudomonas aeruginosa
pza03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU749_000340 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU749_000340 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pza02044
]
HU749_000340 (tssH)
Secretion system [BR:
pza02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU749_000340 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Zeta_toxin
Sigma54_activat
AAA_25
nSTAND3
TniB
AAA_7
ATPase_2
NACHT
AAA_14
Torsin
AAA_18
Hpr_kinase_C
Clp_N
CbiA
SRP54
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
QXH94880
LinkDB
All DBs
Position
73742..76432
Genome browser
AA seq
896 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NIEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSSEFDKVKVEALSERFDEYVGDSPENALTASDGFNAGAVPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGVVIGSRQTQSENL
LSAERERLAELEGRWAEEKTLVDELLATRATLRERVGVVDSEDNSEASDNESHQLREKLV
DLQQRLTALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRII
GQDHALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVIT
INMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFF
QVFDKGVMEDGEGRVIDFKNTLILLTTNAGTELIAQVCKDPQNVPEPEEIAKALRQPLLE
IFPPALLGRLVTIPYYPLSDEMLKAITRLQLNRIKKRVESTHKVAFDYDDAVIDLIVSRC
TETESGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISAVDNELQYDFSDAA
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgccgcgttgttcggcaaactcaacagcgtggcctacaaagcc
attgaagccgccaccgtgttctgcaaattgcgcggtaacccttatgtggaactggcccac
tggtttcaccagttgctgcaactgcaggactcggacctgcaccgcatcattcgccagttc
aacatcgagccggcgcgcctggcccgcgacctgaccgaagccctggaccgcctgccacgg
ggttcgacgtcgatcaccgacctgtcgtcccacgtggaagaagccgtggaacgcggctgg
gtctacggcagcctgatgttcggcgaaagccaggtgcgcaccggttacctggtgctgggc
attctcaagaccccgagcctgcgccacgcgctgctgggcctgtcgtcggagttcgacaag
gtcaaggtcgaagccctgagcgaacggtttgacgaatacgtcggcgactcgccggaaaac
gccctgactgccagcgacggcttcaatgccggtgccgtgccgggcgaagccagcggcgcc
atggcccctagcgccatgggcaaacaggaagccctcaagcgctttaccgtcgaccttacc
gagcaggcccgcagcggcaagctcgacccaatcgtcggccgtgacgaagagatccgccaa
ctggtggacatcctcatgcgccgccggcagaacaacccgatccttaccggtgaagccggc
gtgggcaagaccgcggtggtcgaaggctttgccctgcgcatcgtcgccggcgacgtgccg
ccggccctcaaggacgtggaactgcgcagccttgacgttggcctgttgcaggccggcgcg
agcatgaaaggcgagttcgaacagcgcctgcgccaggtcatcgaagacgtccaggcctcg
cccaagccgatcatcctgttcatcgacgaagcccacaccctggtgggtgccggcggcgcc
gccggcacgggcgacgcggccaacctgctcaagccggcgttggcccgcggcaccttgcgc
accgtggccgccacgacctgggccgagtacaagaagcacatcgaaaaagacccggccctg
acccgccgtttccaagtggtgcaagtggccgagccgtcggaagacaaggccctgctgatg
atgcgcggcgtggcctcgaccatggaaaaacaccaccaggtgcagatcctcgacgaagcc
ctggaagcctcggtcaagctgtcccaccgctacattcccgcgcgccagctgccggacaag
tccgtgagcctgctggacaccgcctgcgcccgcgtcgccatcagcctgcacgccgtaccg
gccgaagtggacgacagccgtcggcgcatcgaagcgctggaaaccgagctgcaaatcatc
gcccgtgaacacgcgattggcgtggtcatcggcagccgccagacccagagcgaaaacctg
ctgagcgccgagcgcgaacgcctggccgagctggaaggccgttgggccgaagagaaaacc
ctggtggacgaactgctcgccacccgtgccaccttgcgcgaacgcgttggcgtggtggac
agcgaagacaacagcgaagcttctgacaacgaaagccaccaactgcgtgaaaaactggtg
gacctgcaacagcgcctgaccgcgctgcaaggcgaaaccccgctgatcctgccgaccgtg
gattaccaggccgtggcctcggtggtcgccgactggaccggtatcccggtgggccgcatg
gcccgcaacgaactggaaaccgtgctcaacctagaccagcacctgaagaaacgcatcatc
ggccaggaccatgccttgcagatgatcgccaagcgcatccagacctcccgcgccggcctc
gacaacccgagcaagccgattggtgtgttcatgctcgccggcacttccggcgtgggcaag
accgaaaccgccctggccctggccgaagccatgtacggcggcgaacagaacgttatcacc
atcaacatgagcgagttccaggaagcccacaccgtgtcgaccctcaagggcgcgccaccg
ggctacatcggctatggcgaaggcggcgtgctgaccgaggccgtgcggcgcaaaccgtac
agcgtggtgttgctggacgaggtggaaaaggcccacccggacgtgcatgagatcttcttc
caggtgttcgacaaaggcgtgatggaggacggcgaaggccgggtgatcgacttcaagaac
accttgatcctgctgaccaccaacgccggcaccgagctgatcgcccaggtctgcaaagac
ccgcagaacgtgcccgagccggaagaaatcgccaaggccctgcgccaaccgttgctggag
atttttccgccggccttgctcggccgcctggtgacgatcccgtactacccgctcagcgac
gagatgctcaaggccatcacccgcctgcaactcaaccgcatcaagaagcgcgtggagagc
acccacaaagtcgccttcgactacgacgacgcagtgatcgacctgatcgtctcgcgttgc
accgaaaccgaaagcggcgggcgcatgatcgacaccatcctgaccaacagcctgctgccg
gacatgagccgcgagttcctgacccgcatgctcgaaggcaaggctttggccggggtgcgg
atcagcgccgtggataacgaattgcagtacgatttcagcgacgcggcctga
DBGET
integrated database retrieval system
