Pseudomonas ogarae SWRI108: HU749_000420
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Entry
HU749_000420 CDS
T07889
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU749_000420 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pza02044
]
HU749_000420 (tssK)
Secretion system [BR:
pza02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU749_000420 (tssK)
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QXH94896
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Position
complement(98863..100194)
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AA seq
443 aa
AA seq
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MNHDKVVWQEGMLLRPQHLQHNDRYFDHQLKVRTRLLASYAWGFLALEIDLQFLNMGQLV
VSQASGVLPDGSLFELGGNTEPLALEVPSNTSNTPIYLALPLVTGNHIESRRPEQSDVLA
RYTIYDAQVTDSNAGDSGGSQISCGRPDLRLLLGEQQSDHAFVKLKLCEVLDTTADGVIR
LDPDFVPTFLQARSSHYLLSCLKEIIGMLAHRGDSLAERIRFNGKAGGAQVGDFMMLQLI
NRSELLLRHYLDLEQVHPETLYRMLLALLGELATFSSDSKRPPLTNRYQHSEQGACFRSL
MQAIRQVLSMVLEQHAIELQLQPRQYGITVSPMQDLTLLDTASFVLAASANCDSEELRHR
LPSNLKVGSVERIRQLVNLHLPGIKIRPLPVAPRQIAFHANKTYFILEPSSEDLAQLKRS
AGFAFHVCGDFAELELNFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgataaagtcgtctggcaagaaggcatgttgttgcgtccacaacatttgcaa
cacaacgatcgttatttcgatcaccagttgaaggttcgtacccggttgctggccagttac
gcctggggattcctggcgctggaaatcgatctgcaatttctcaacatgggccaactggtg
gtcagccaggccagcggggtcctgccggacggcagcctgttcgagctcggtggcaacacc
gagccgttggccctggaagtaccgtccaataccagcaatacaccgatctacctcgcgctg
ccattggtgaccggcaaccacatcgagtcccgtcgtccggagcaatctgatgtgctggcg
cgctacaccatctacgacgcgcaggtgaccgactccaacgccggagattccggcgggagc
cagatcagttgtggccggccggacctgcgcctgctgttgggcgagcaacagagcgatcat
gcgtttgtgaagctcaagctctgtgaggtgctcgataccactgccgatggagtgatcagg
ctcgacccggactttgtgccgaccttcctccaggctcgttcatcccattatttgctgtcg
tgtctcaaggagatcatcggcatgcttgcccatcggggtgacagccttgccgagcggatc
cgcttcaatggcaaggccggtggtgcacaagtgggcgatttcatgatgctgcaactgatc
aaccgtagcgaactgttgctgcgtcattatctggacctggagcaagtacatcccgaaacg
ctctaccgaatgctactggccctgttgggtgaactggcgacgttctccagtgacagcaag
cgtccgccgctcaccaaccgctaccagcacagcgaacagggcgcatgttttcgaagcctg
atgcaagcgatccgccaggtgctgtcgatggtgctcgagcagcacgcgatcgagctgcaa
ttgcagccgcgccaatatggaatcaccgtctcgccgatgcaggaccttaccctgctggat
acggcttcattcgtactggcggctagcgccaactgtgacagcgaagagttgcgccatcga
ctgccgtcgaacctcaaggttggctcggtggagcgcatccgccagttggtcaacctgcat
ctgcccggtatcaagatcaggcctctgcccgtggctccgcgacagatcgcattccatgcc
aacaaaacctatttcatcctggagcccagctccgaagacctggcgcaactgaagcgctcg
gcaggcttcgcgttccatgtgtgcggtgatttcgcggagcttgaactgaatttttgggcc
atcaggaattga
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