Pseudomonas ogarae SWRI108: HU749_000445
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Entry
HU749_000445 CDS
T07889
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza02025
Biofilm formation - Pseudomonas aeruginosa
pza03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU749_000445 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU749_000445 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pza02044
]
HU749_000445 (tssH)
Secretion system [BR:
pza02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU749_000445 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_22
AAA_16
ClpB_D2-small
nSTAND3
AAA_7
Clp_N
NACHT
Sigma54_activat
TniB
AAA_29
AAA_33
SRP54
Mg_chelatase
bpMoxR
T2SSE
NBD_SMAX1
Hpr_kinase_C
Sec3_CC
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QXH94901
LinkDB
All DBs
Position
complement(103297..105882)
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AA seq
861 aa
AA seq
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MINVDLQQLIQALDAETRSDLSRSAEQCVARGADKVLVEDLMLGLLERPQGLLARALQDA
QVSAGELSAALQPRMGHSASRNPVFAPELVQWLQDALLVANLELGCSQVGQAALILALLR
NPLRYAGSAYQALLTRLNVDRLKDFALSQQTHPVADHSAKPDDSLLARFTHDLTRQAREG
QLDPVLCRDGEIRQMIDILVRRRKNNPIVVGEAGVGKTAIVEGLALRIAAAEVPSVLEGV
ELLSLDMGLLQAGASIKGEFERRLKGVIDEVKASPKSIILFIDEAHTLIGAGGNAGGADA
ANLLKPALARGELRTIAATTWNEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLAR
VYENSHGIYLRDDAVVAAAQLSARYLAGRQLPDKAVDVLDTACARVRISLAAAPHSLERL
RGELAEGERQRQALRRDAQAGISIDLQALEALEVRLEAIEDERRTLEIQWAEQRILAERL
LSLRQQLAKAREASVDQPLSVEALEAALHETHGTLVAAQVQERLVSFEVCPRLVAEVISA
WTGIPLAQLAREHSLKVASFATDLRARIRGQEPAVRALDRAMRAAAAGLNKPDAPVGVFL
LVGPSGVGKTETAHALADLLYGGDRFITTLNMAEFQEKHTVSRLIGAPPGYVGFGEGGML
TEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGLANDGEGREIDFRNTLILMTSNLGS
ERINELCENGTKPSAECLEESIRPILSQHFKPALLARMCVVPYYPLNGPVLRELVEVKLD
RLGERLHRRQLGFSYCGHLVNHLVERCSRNDRGARLIDQLLDLHLMPLVADRLLAAMAGG
EQLRHVHAVLNGDASLACEFS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagaccttcagcaactgatccaggcgttggacgccgaaaccagaagcgat
ctgtcgcgctcggccgagcaatgcgtcgcccgtggggcagacaaagtcctggtggaagac
ttgatgctgggcttgctggaacgtccgcagggcctgctcgcgcgagccttgcaagatgcc
caggtaagcgcaggtgaactgagcgctgcgctgcaaccacggatggggcacagcgcttcg
cgcaatccggtattcgccccggagctggtgcaatggttgcaggatgcactgctggtagcc
aatctcgagctgggctgcagccaggtcggacaagccgcgttgatcctggcgttgctgcgc
aacccgcttcgctatgcagggagtgcttaccaggcgctgctcacccgactgaacgtcgat
cggttgaaagatttcgccttgtcgcaacagacccacccggtagccgatcactccgccaag
ccggacgactccctgctggcgcgcttcacccatgacctgacccggcaggctcgtgaaggt
caactcgacccggtgctttgtcgcgacggtgaaatcaggcagatgatcgatatcctcgtt
cgtcgccgcaagaacaatccaatcgtggtcggtgaggcaggcgtgggcaagaccgccatc
gtcgaaggcctggcgttgcgcatcgccgccgcagaagtaccgtcagtactcgaaggcgtc
gagctgctttcgctggatatggggctcctgcaggccggcgccagcataaaaggtgaattc
gaacgtcgtctcaaaggggtgatcgacgaggtcaaggcttcgccaaaatccatcatcctg
ttcatcgatgaggctcacaccttgattggcgcgggtggcaacgccgggggcgccgatgcg
gccaacctgctcaagccggccttggcccggggcgagctgcgtactatcgcggctaccacc
tggaacgagtacaaaaaatattttgaaaaagacccggccctggcccgtcgtttccaaccg
gtgcaattgcacgagccgaccgtcagtgaggcagtgaccattctgcgtggtctggcccgg
gtctacgagaacagtcacggcatttacctgcgggatgatgcggtggtcgcggcggcgcaa
ttgtcggcccgctacctggctggtcgtcagttgccagacaaggctgtggatgtgttggac
actgcctgcgcccgcgtgcgcatcagcctggccgctgcgccgcatagcctggagcgattg
cgcggcgagttggctgaaggcgagcgccagcgccaagcgcttcgtcgtgatgcgcaggcc
ggcatatcgattgatcttcaggcgctggaagcgctggaggtgcgcctggaggccatcgaa
gacgagcgccgaacgctggaaatccaatgggccgagcaacgtattcttgcggaacgcctg
ttgtcgcttcgccagcaattggccaaggcacgggaagcctcggtggatcagcccctcagc
gtcgaagcactggaagcggcgttgcatgaaacacacggcacgttggtggctgcgcaagtc
caggagcgcctggtcagcttcgaagtttgcccgcgactggtagccgaagtcattagtgcc
tggaccggtataccgctggcacaactggcgcgggagcacagtttgaaagtcgccagtttc
gctacggacctgcgtgctcgtattcgtggtcaggagccggctgtgcgggcgcttgatcgc
gcgatgcgtgccgccgccgcaggcctgaacaaacccgacgctccggtgggcgtgtttctg
ttggtagggcccagtggcgtcggcaagaccgagacggcgcatgccctggccgacctgctc
tacggcggtgatcgttttatcaccacgctcaacatggccgaattccaggagaaacatacg
gtttcccggctgattggcgcgccgccgggctacgtcggttttggcgaaggcggcatgctc
accgaagccgtgcggcaaaagccctattcagtggtgctgctcgatgaggtcgaaaaagcc
gacccggatgtgttgaatctgttctaccagatattcgacaagggcttggccaacgacgga
gaagggcgggagattgattttcgcaacaccctgatcctgatgacgtcgaacctgggcagc
gaacgcatcaacgagttgtgcgaaaacggtacaaaaccaagtgccgaatgccttgaagag
tccattcgcccaatactcagtcaacatttcaaacccgcgctgttggcgcgcatgtgcgtg
gtgccgtactacccgctcaacgggccggtgttacgtgaactggtggaagtcaaactcgac
cgcctgggcgagcggctgcatcgtcgtcaattgggtttcagttattgcgggcaccttgtg
aaccacctggtcgagcgttgcagtcgtaatgatcgtggcgcacgactgattgaccaactg
cttgacctgcacctgatgccgctggttgccgaccggttgctcgccgccatggccggtggc
gaacagctacggcatgtacacgccgtgctcaacggcgacgccagtctcgcgtgtgagttc
tcctga
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