Pseudomonas ogarae SWRI108: HU749_000470
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Entry
HU749_000470 CDS
T07889
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU749_000470 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pza02044
]
HU749_000470 (tssB)
Secretion system [BR:
pza02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU749_000470 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
QXH94906
LinkDB
All DBs
Position
complement(110576..111079)
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AA seq
167 aa
AA seq
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MAKEGSIAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTHRRDERKIEDRKPIGIDKM
TFDEVLAKQELNLTLSVPNRLQEESETEELAVQLRVNSMKDFTPASLVEQVPELSKLMEL
RDALMALKGPLGNAPAFRKAIEGVLGNDDSRRRVLDELGLNTTAKNA
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaggctcgatcgcccccaaggaacgcatcaacgttaccttcaaacctgcc
accggcggtgcccaggaagaaattgaactgcccttgaagctattggcgatcggtgattac
acccaccgcagggatgaacgcaagatcgaggatcgcaaaccgattggcatcgacaagatg
accttcgacgaggtgttggccaagcaagagctgaacctgaccctcagcgtaccgaatcgt
cttcaggaagaaagcgaaactgaagagctggcagtacagctgcgtgtgaactcgatgaag
gatttcaccccggcgagcctggtcgagcaagtgccggagctcagcaaactgatggagttg
cgcgacgccctgatggcgctcaaagggccattgggtaacgcgccggcgtttcgcaaggcc
atcgaaggtgtactcggcaatgacgattcccgccgccgcgtactggatgagctgggcctg
aacaccacagcgaagaacgcttga
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