Pseudomonas ogarae SWRI108: HU749_001055
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Entry
HU749_001055 CDS
T07889
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza03030
DNA replication
pza03410
Base excision repair
pza03420
Nucleotide excision repair
pza03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU749_001055 (polA)
03410 Base excision repair
HU749_001055 (polA)
03420 Nucleotide excision repair
HU749_001055 (polA)
03440 Homologous recombination
HU749_001055 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pza03032
]
HU749_001055 (polA)
03400 DNA repair and recombination proteins [BR:
pza03400
]
HU749_001055 (polA)
Enzymes [BR:
pza01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU749_001055 (polA)
DNA replication proteins [BR:
pza03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HU749_001055 (polA)
DNA repair and recombination proteins [BR:
pza03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HU749_001055 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HU749_001055 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
QXH95020
LinkDB
All DBs
Position
251821..254589
Genome browser
AA seq
922 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDELYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSALDVAGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVATLPIRGAKTLAAKLEEHKEM
ALLSYELATIKTDVPLDVGLDDLQMGTPDHEKLAELYTLLEFKSWFEENQRDAKRAGQEI
VEVAEEQPGAAEAKYEVILDQARFDAWLAKLDKAPLFAFVTETNGGDAQHSQLVGLSFAV
APFEAAYIPLTHSYMGVPEQLDRDTVLKALKPLLENPNKLKVGQHAKFETNILANCAIGG
DQNNGILVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGQSKTDFQDIAGKGVKQLTFD
QISLELAGPYAAEDADVTFRLHQALQEKLAATPSLGTVLNDIEMPLMPVLARIERQGALV
DANLLGVQSVELGEKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPVLSKTAKGQA
STAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINSRTGRVHTNYQQAVAAT
GRLSSIDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLYA
FRHNLDVHRATAAEVFGIELEAVTQDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQA
YIDRYFARYPGVLAYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPALRKGAERTAINA
PMQGTAADIIKKAMVAVDRWLTASGLDAKVILQVHDELVLEVREDLVDQVREEIRQHMSA
AATLDVPLLVEVGVGNNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagctcccctcgtcctggtggacggttcttcttatctgtaccgcgcctttcat
gcgctgccaccgctgaccacgtccaagggcctgccgaccggtgcggtcaagggcgtgctg
aacatgctcaagagcctgcgcaagcagtatccggacagtccgttcgccgtggtcttcgac
gccaagggtgggacgtttcgcgatgagctgtacgccgaatacaaggccaaccgcccgagc
atgcccgacgacatgcgcgtgcagatcgagccgctgcatgccagcgtcaaggccctgggg
ttcccgctgctgtgcgtggacaacgtcgaggccgatgacgtgatcggcaccctggcccgc
agcagcgcggcagccgaccgtccggtggtgatctccactggcgacaaggacatggcgcag
ttggtcgacgggcacattaccttggtcaataccatgaccggtagcgccctggacgtggct
ggcgtgaaggagaagtttggcgtcgctcccgagcagatcatcgattacctggcgttgatg
ggcgattcttccgacaacatcccgggcgtcccagggatcggaccgaagaccgcttccggc
ctgctggtgggcgtcaatggcggcctgaccgagctgtatgcgcaactggacatcgtcgcc
accttgccgatccgtggcgccaagaccctggccgccaagctcgaagagcacaaggaaatg
gcgttgctttcctacgagctggcgaccatcaagaccgacgtaccgctggatgtcggcctc
gacgacctgcaaatgggcacgcccgatcacgagaaactcgccgagctgtacacgctgctg
gaattcaagagctggttcgaagagaaccagcgggacgccaagcgtgccggccaggagatc
gtcgaagttgccgaagaacagcccggcgctgccgaggccaagtacgaggtcatcctcgat
caggcgcgcttcgacgcgtggctggccaaactggacaaagcgccgctgtttgccttcgtc
accgaaaccaacggcggtgatgcccagcattcgcaactcgtcggcttgtcgttcgccgtg
gcccctttcgaggcggcctacattccgctgacccattcctacatgggcgtgccggagcaa
ctggaccgcgacacggtgctcaaggccctcaagccgctgctggaaaacccgaacaagctc
aaggtcggccagcacgccaagttcgaaaccaacatcctggccaactgcgccatcggtggt
gatcagaacaacggcatcctggtccagggcatcgccttcgacaccatgcttgaatcctac
gtgctggactccaccgcgacccgccacgacatggacagcctggcgctcaagtacctgggc
cagagcaagaccgatttccaggacatcgcgggcaaaggggtcaagcaactgaccttcgac
cagatctccctggaactggccggcccttacgccgccgaagacgccgacgtgaccttccgc
ctgcatcaggctttgcaggaaaaactggccgccacgccaagcctgggcaccgtgctcaac
gacatcgaaatgccgctgatgccggtcctggcgcgcatcgagcgccagggtgcgctggtc
gatgccaacctgctgggtgtgcagagtgtcgagttgggcgagaaactggtggcgctggag
cgtgaggcgttcgccatcgccggcgaggaattcaacctgggctcgccgaagcaattaggc
gtgatcctgtacgaaaaactcggcttgccggtgctcagcaaaaccgccaagggccaggcg
tccaccgccgaagcggtgctcgccgagctggcggagcaggattacccgctgcccaaggtg
ctgatgcagtaccgctcgctgagcaagctcaagagcacctacaccgatcgcctgccggaa
cagatcaacagccgcacgggtcgcgtccataccaattatcaacaggccgtcgccgcgacg
gggcgcctgtcgtccatcgacccgaacctgcagaacattccgatccgcacggccgaaggc
cgacgcatccgccaggcgttcgttgcgccgaaaggctacaagctgctggcggcggactac
tcgcagatcgaactgcggatcatggcgcacctggccaaggacgaaggcctgctctatgcg
tttcgccataacctggatgtgcaccgggccactgctgccgaggtgttcggcattgagctg
gaagccgtcacccaggaccagcgccgcagcgccaaggcgatcaacttcggcttgatctac
ggcatgagtgcgttcggcctggccaagcagatcggcgtcgatcgcaaacaatcccaggct
tatatcgaccgctactttgcccgctacccgggtgtgttggcgtacatggagcgcacccgc
gcccaggcggccgagcaaggttttgtcgaaaccattttcggtcgccggctgtacctgccg
gacatcaacgcgaaaaacccggccctgcgcaaaggcgccgagcgcaccgccatcaacgcg
ccgatgcagggcacggcggccgacatcatcaagaaagccatggtggctgtggaccgctgg
ctgacggcgtccgggctggatgcgaaggtcatcctgcaggtacacgacgaactggtgctg
gaagtgcgtgaagacctggtcgaccaggtacgcgaggaaatccgccagcacatgagcgcc
gccgccaccctggacgtgccgctgctggtggaagtgggcgtgggcaacaactgggacgag
gcgcactga
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