Pseudomonas ogarae SWRI108: HU749_001250
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Entry
HU749_001250 CDS
T07889
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pza
Pseudomonas ogarae SWRI108
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pza03009
]
HU749_001250 (rsmB)
Enzymes [BR:
pza01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HU749_001250 (rsmB)
Ribosome biogenesis [BR:
pza03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HU749_001250 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
PCMT
MTS
FtsJ
Methyltransf_31
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
QXH95058
LinkDB
All DBs
Position
296434..297744
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AA seq
436 aa
AA seq
DB search
MNPRLAAAKALAAVLSGKASLNSSLPTQLDKVEDRDRGFTQDLAFGTARWQPRLSALAAK
LLQKPFKAADADVEALLLVGLYQLLYTRVPAHAAIGETVGCADKLKKPWAKALINAVLRR
AQRESETLLAELEHDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHH
SRDAYLALLGEAGIPAIPCQYSRDGIVLETPGDVRALPGFAEGWISVQDEAAQLAADLLD
LAPGQRVLDACCAPGGKTCHILEVEPKLAGVVAVDLEAKRLVRVKENLERLGLEAELIAA
DGRDTATWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQPDDIAALAVLQGELLDALWP
TLEVGGMLLYATCSTLPTENTDVIEAFLARTPGARELDIASQAGLKQPHGRQLLAQEGGH
DGFYYAKLIKIAAARG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcgtctggccgccgccaaggcacttgccgccgtcctcagcggaaaagcctcc
ctcaacagctccctgccgacccaactggacaaggtggaagaccgtgatcgcggtttcacc
caggacctggcgttcggcaccgcccgttggcagccgcggctgtcggccctcgcggcgaag
ttgttgcagaagccgttcaaggccgccgatgccgacgtcgaggcgctgctgctggtgggg
ctctatcaattgctctacacccgcgtcccggcccacgccgccatcggcgaaaccgtgggc
tgcgccgacaagctgaagaagccctgggccaaggccctgatcaatgccgtgttgcgccgc
gcccagcgggaaagcgaaaccttgttggccgaactggagcacgacccggtggtccgcacg
gcgcacccgcgctggttgcagaaatccctgaaggcgttctggcccgaacaatgggaagcc
atctgcgcggccaacaatgcccacccgccgatgatcctgcgggtcaaccgtcgccaccat
agccgcgacgcctacctggcgttgctgggcgaggcgggtatcccggccatcccgtgccag
tacagccgcgacggcatcgtcctggaaacccccggcgatgtgcgtgccttgccgggcttt
gccgagggctggatcagcgtccaggacgaagccgcccaactggccgccgacttgctggac
ctggcgcccggccaacgggtgctggacgcctgctgcgcgccgggtggcaagacctgtcac
atccttgaggtcgagccgaagctggctggcgtggtggcggtggacctggaagccaagcgc
ctggtgcgggtgaaggaaaacctcgagcgtctgggcctggaggccgagctgatcgccgcc
gacggccgcgacaccgcgacctggtgggacggcaagccgttccagcgcattctcctggac
gcgccatgctcggccaccggcgtgatccgccgccatccggacatcaagctcacccgccag
ccggacgacattgcggcgctggccgtgttgcagggcgaactgctcgatgccctgtggcca
accctggaagtgggcggcatgctgctctacgccacctgctcgaccttgccgaccgagaac
accgacgtgatcgaagccttcctcgcccgcaccccaggcgcccgggagctggacattgcc
agccaggccggcctcaagcagccccatggccgccagttgctggcccaagagggcggacat
gatgggttctattacgccaagctgatcaagatcgccgccgcacgcggttaa
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