Pseudomonas zarinae: HU749_001730
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Entry
HU749_001730 CDS
T07889
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
pza
Pseudomonas zarinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_2
TPR_14
TPR_7
TPR_19
TPR_16
TPR_6
TPR_1
TPR_11
TPR_17
TPR_12
TPR_10
Motif
Other DBs
NCBI-ProteinID:
QXH95144
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Position
393668..396148
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AA seq
826 aa
AA seq
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MPRTVGPFIQRGLRPLFRVALCSQLCWPMLAFADTAYDQMVLDARAGHYTPALTALRQVP
AGQASTAQISDHLQIASWAGLDAEVVTVYESQGRHRALPVQALTATARAYRNLKRWDSAQ
ELYRQALVIDPLNPDLQLGLALTQADGGQPDEAVTRAKAMVAAKPADPMRRLALGYALTR
ANNPHEALFEYDQAFTRAGNSPEIAREYIYALQRARLPEPALRLARLQPGLIDRGVQRRL
EGDVAAERVRLADMTSRSEQERFVIADRALADYDKLLATWTPVAEAHDDVLRWRIDRMGA
LNARARRAEVIAEYQKLIAEGVSIPTYALRWVASSYLEQREPEIAVELYRRILIAPDADP
AERFEDSTALYYALLESEKSAEARALAEDMAKNQRPRIELKGLPIGNPNDEWMDAQQLAA
QAGTYGADLPSAEARLDTLVNQGPGNTGMRLAQADLYQARDWPRRSENLLKEVEATIPRN
RDLEIAQARAAMDLQEWRQMDALTDDVVARYPENAHVKRLQRQRDVHDMAELRIEAYTGK
SYGGGSGDAGAVTGSRDFGIETLLYSPPIDEDWRLFGGAGYATGDFEEGTGHHRWQRLGV
ERRTRDMTLEAEVSNHSYGSGDKQGARLAVARDIDDHWQYGGSLDYLSANTPLRALNSGI
RANGGSGFVRWRANESREWRLALSPSHFSDGNNRLETQLTGREGIYSTPRLQVELGLEVG
ASRNSGSNEVPYFNPKSDFSVMPTVSANHVLYRRYETTWSQQFQVGAGTYSQRDYNTAAM
GLLSYGQRFIWNDVLEAGAALSWLNRPYDGDRESDLRLLVDLTYRF
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtactgtgggtccttttattcaacgtggtttgcgcccgttgtttcgcgtcgcg
ctgtgcagccaattgtgctggccgatgctggcgtttgccgataccgcctatgaccaaatg
gtgctcgacgcccgtgcaggccattacacgcctgcgctgaccgcgttgcgccaggtgccg
gctggccaggccagcactgcgcagatcagcgaccacctgcagatcgccagttgggctggc
ctcgacgccgaggtggtgacggtctatgagagccagggccgccatcgagcgctgcctgtc
caggcgctgactgctacggctcgcgcctatcgaaacctcaagcgttgggattcggcgcaa
gagctgtaccgccaggccttggtgatcgatcccctgaaccccgacctgcaactcggcctg
gccttgacccaggccgatggcggtcagcccgacgaagccgtcacccgcgccaaggccatg
gtcgccgctaaaccggcagatccgatgcgtcgactggcgctgggttatgccctgacccgc
gccaacaacccccacgaagcgctgttcgaatacgaccaggccttcacccgcgcgggcaac
agcccagagattgcacgcgaatacatctacgctctgcaacgcgcgcggctgcccgaaccg
gcgctgcgcctggcgcgtctgcagccggggctgatcgatcgtggtgtgcagcgccgcctg
gaaggtgacgtagcagccgaacgggtgcgcctggcggacatgaccagtcgcagtgaacag
gagcgcttcgtcattgccgaccgcgccctggccgactacgacaagctgctcgccacctgg
accccggtggccgaggcccatgacgacgtactccgttggcgcatcgatcgcatgggcgcg
ctcaatgcccgcgcccgtcgggctgaagtgattgccgaataccagaagctgatcgccgag
ggcgtgagcattcccacgtatgccctgcgttgggtggcttcttcctatctggagcagcgt
gagccggaaatcgccgtcgaactgtaccgccggattctgatcgcgccggatgccgatcct
gcggagcgctttgaagacagcaccgcgctctactacgcgttgctggaaagtgaaaagtcc
gcagaggcccgcgcactggccgaagacatggcaaaaaaccagcgcccacgcatcgagctc
aagggcctgccgatcggcaaccccaacgatgaatggatggacgcccagcaactcgccgcc
caggcaggcacttacggcgccgacctgccttctgccgaagcgcgcctggacaccttggtc
aaccaaggccccggcaacaccggcatgcgcctggcccaggccgatctgtaccaggcccgc
gactggccgcgccgttcggaaaacctgctcaaggaagtcgaggccacgatcccgcgcaac
cgtgacctggaaatcgcccaggcccgcgccgccatggatttgcaggaatggcggcagatg
gatgcactgaccgacgacgtggtcgcccgctatccggaaaatgcccatgtcaaacgcctg
caacgccagcgcgacgtacacgacatggccgaactgcgcattgaggcctacaccggcaag
agctatggcggtggcagcggtgacgccggtgccgtcactggcagtcgggattttggcatt
gaaacgctgctctacagcccgcccatcgatgaagactggcggctgttcggcggcgccggc
tacgccactggtgatttcgaggaaggcaccggccaccaccgttggcagcgcctgggtgtg
gagcgtcgcacccgggacatgacgctggaagcggaggtctccaatcactcctatggctcc
ggcgacaagcagggtgcgcgcctggccgtggcccgggacatcgacgaccactggcagtac
ggcggcagcctggattatctctcggccaataccccgctgcgggcgctcaacagtggcatc
cgcgccaacggcggtagcggtttcgtccgctggcgggccaatgaaagccgcgagtggcga
ctggcgctcagcccgtcccatttcagcgatggcaacaaccgcctcgaaacccagctgact
ggccgcgagggcatctacagcacaccgcgcctgcaagtggagctggggctggaagtgggt
gccagtcgcaacagcggttctaacgaagtgccttatttcaatccgaaatcggacttcagc
gtcatgccgaccgtgagcgccaaccacgtgttgtaccgccgctacgagaccacgtggagc
cagcagttccaggtcggtgccggtacctacagccagcgcgactacaacaccgcagccatg
ggattgctcagctacggccagcgtttcatctggaacgacgtgctggaggccggtgccgcg
ctgagctggctcaaccgcccctacgacggcgatcgcgaaagcgatctgcgcctgcttgtc
gacctcacctatcgcttctag
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