Pseudomonas ogarae SWRI108: HU749_002465
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Entry
HU749_002465 CDS
T07889
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza00521
Streptomycin biosynthesis
pza00523
Polyketide sugar unit biosynthesis
pza00541
Biosynthesis of various nucleotide sugars
pza01100
Metabolic pathways
pza01110
Biosynthesis of secondary metabolites
pza01250
Biosynthesis of nucleotide sugars
Module
pza_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HU749_002465 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HU749_002465 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HU749_002465 (rfbC)
Enzymes [BR:
pza01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HU749_002465 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QXH95284
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Position
complement(580249..580794)
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AA seq
181 aa
AA seq
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MNVIATRLPDVLVIEPKVFGDDRGFFYESFNARAFAEATGCTLQFVQDNHSRSTRGVLRG
LHYQIEQAQGKLVRVTAGEVLDVAVDIRRSSPTFGQWASVRLSAQNHRQLWVPPGFAHGF
VVLSESADFLYKTTDYYAPSAERCIRWDDPQLAIDWELDGTPILSAKDQNGKALHEADLF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtcatcgccacccgcttgccggacgtcctggtcatcgaaccgaaagtcttcggc
gacgaccgggggtttttctacgaaagcttcaatgcccgggcgtttgccgaagcaaccggc
tgcaccctgcagttcgtccaggacaatcattcacgctccacccggggcgtgttgcggggc
ctgcactatcagatcgaacaggcccagggaaaactcgtgcgcgtcaccgcgggggaggtg
ctggatgtcgcggtggacatccgccgcagctcgccgaccttcggccagtgggccagcgta
cgcctgtcggcgcagaaccatcggcaactgtgggtgccgccagggtttgcccacggtttc
gtcgtactgagcgaatcagcagacttcctctacaagaccaccgactactacgcgccatcg
gccgaacgctgcattcgctgggacgacccgcagctggccatcgattgggagctcgacggc
acgccgatcctttcggccaaggaccagaacggcaaggccctgcacgaggccgacctgttc
ccatga
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