Pseudomonas ogarae SWRI108: HU749_005175
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Entry
HU749_005175 CDS
T07889
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pza
Pseudomonas ogarae SWRI108
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pza03021
]
HU749_005175 (nusA)
03009 Ribosome biogenesis [BR:
pza03009
]
HU749_005175 (nusA)
Transcription machinery [BR:
pza03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HU749_005175 (nusA)
Ribosome biogenesis [BR:
pza03009
]
Prokaryotic type
rRNA transcription factors
HU749_005175 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
RNA_pol_A_CTD
DUF507
DUF2187
Motif
Other DBs
NCBI-ProteinID:
QXH95777
LinkDB
All DBs
Position
1220609..1222090
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AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPANVIFEALELALATATKKRFEDEVDLRVEINRHTGAYETFR
RWTVVEEADLDDPAIETWPSKVAETHPGAKVGDVVEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIEELEVDEELAQVLVDEGFTSLEEIAYVPVEEMLNIDGFDEEIVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtatccaatgaaaagggcgtaccggct
aacgttatttttgaagcgctggagctggctctggccactgctaccaagaagcggtttgaa
gacgaagttgatttgcgtgtggaaatcaatcgccacaccggtgcctacgagactttccgt
cgctggacggtggtcgaggaagccgacctggacgatccggctatcgaaacctggccgagc
aaggttgcagaaacgcatccgggcgccaaggtcggtgatgtagtagaagaaaaaatcgag
tccattgagttcggtcgcatcgctgcacagactgccaagcaggttattgtgcagaaagtt
cgcgaagccgagcgcgcgcaagtcgtcgacgcttatcgcgagcgcctgggggaaatcatc
tccggcaccgtgaaaaaagtgacccgtgacaacgtgatcgtcgacctgggcaacaacgcc
gaagcgttgctggctcgcgaagacatcatctctcgcgaaactttccgggttggcgtgcgc
ttgcgtgcgctgctcaaggaaatccgcaccgagaaccgcggcccgcagctgatcctgtcg
cgtacagcgccggaaatgctgatcgagttgttccgcatcgaagtgccggaaattgctgaa
ggcctgatcgaagtcatggccgcctcccgtgatccgggttcgcgtgccaagatcgcggtc
cgctccaaggacaagcgcatcgacccgcaaggtgcctgcatcggcatgcgtggttcgcgt
gtccaggccgtatccggcgagttgggcggcgagcgcgtggacatcgtcctgtgggacgac
aacccggctcagttcgtgatcaatgccatgtcgcctgctgaagtggcggcaattatcgtc
gacgaagatgcccacgccatggacatcgccgttggcgcagacaatctggctcaggccatc
ggtcgcggtggtcagaacgtgcgtctggccagccaattgactggctggaccctgaacgtg
atgaccgaatcggacatccaggctaagcagcaagctgaaaccggcgacatcctgcgcaac
ttcatcgaagagcttgaagtcgatgaagagctggcgcaggtgctggtggatgaaggcttc
accagcctggaagagattgcctacgtaccggtggaggaaatgctcaacatcgacggcttt
gacgaggagatcgtcaacgagcttcgcgctcgggccaaggatcgtttgttgaccaaagcc
atcgctactgaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggcatggacaaggatttggcgatggaactggcggtgcgcggcgtaattacccgcgaagac
ctggccgagcagtctattgacgatctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccactggttcgagtaa
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