Pseudomonas ogarae SWRI108: HU749_005470
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Entry
HU749_005470 CDS
T07889
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pza
Pseudomonas ogarae SWRI108
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pza03019
]
HU749_005470 (rng)
03009 Ribosome biogenesis [BR:
pza03009
]
HU749_005470 (rng)
Messenger RNA biogenesis [BR:
pza03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HU749_005470 (rng)
Ribosome biogenesis [BR:
pza03009
]
Prokaryotic type
rRNA processing factors
HU749_005470 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
DUF8612
Motif
Other DBs
NCBI-ProteinID:
QXH95831
LinkDB
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Position
1294402..1295859
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AA seq
485 aa
AA seq
DB search
MSEEILINITPMESRVAVVENGVLQEVHVERTQKRGIVGNIYKGKVVRVLPGMQAAFVDI
GLDRAAFIHASEISMREGPAVESISALVHEGQSLVVQVTKDPIGSKGARLTTQLSIPSRY
LVYMPRTAHVGISLKIEDEGERERLKQVVSDCVEKEGIKEAGGFILRTAAEGAGADEILM
DIRYLRRLWDQIAAQIKTIATPSVIYEDLGLALRTLRDLVSPKIEKIRIDSRETFQKTTQ
FVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVVDPAEAMSTID
VNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHQRQVLRTL
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCSSCQGRGKLKTPETVCYEI
FREILREARAYQATGYRVLANQKVVDRLLDEESGNVAELEAFIGRTIRFQVETMYSQEQY
DVVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagatcctgatcaacatcacgccgatggaatcgcgcgtggcggtggttgaa
aacggtgtgctgcaagaggtccacgtcgagcgcacgcaaaagcgtggcatcgtcggcaat
atctataaaggcaaggtggtgcgggtgctgccgggcatgcaggcggccttcgtcgacatc
ggcctggaccgcgcggcattcatccacgcgtcggaaatttccatgcgcgaagggccggcc
gtggagagcatcagcgccctggtgcatgaaggccagagcctggtggtacaggtcaccaag
gaccccattggctccaagggcgcgcgcctgaccacgcaactgtcgattccgtcgcgctac
ctggtgtacatgccgcgtaccgctcacgttggcatttccctgaagatcgaagacgaaggc
gagcgcgagcgcctcaagcaggtggtcagcgactgcgtggaaaaagaaggtatcaaggaa
gccggtgggttcatcctgcgcacggccgccgagggggccggggccgatgagatcctcatg
gacatccgctacctgcgcaggctttgggaccagatcgccgcccagatcaagaccatcgcc
acccccagcgtgatctacgaagacttgggcctggcgctgcggaccctgcgtgatctggtc
agccccaagatcgagaaaattcgtatcgactcccgggaaaccttccagaagaccacccag
ttcgtcgccgaactgatgccggaaatcgccgaccgcctcgagcattaccctggcgagcgg
ccgattttcgacctgtatggcgtcgaggatgaaatccagaaagccctggagcgcaaggta
ccgctcaagtccggcggctacctggtggtcgatccggccgaggccatgagcaccatcgat
gtcaacaccggggcgttcgtcggccatcgcaacctggaagagaccatcttcaagaccaac
ctggaagccgccacggccatcgcccggcaactgcgtctgcgcaacctgggcgggatcatc
atcatcgacttcatcgacatggaagatgaagagcaccagcgccaggtgctgcggactctg
gaaaaacaactcgaacgcgatcacgccaagaccaatatcatcggtatcaccgagctgggc
ctggtgcagatgacccgcaagcgtacccgcgaaagccttgagcaggtgctgtgcgagcca
tgcagcagttgccagggacgcggcaagctcaagaccccggaaaccgtgtgttacgaaatc
ttccgggaaatcctccgggaggcgcgtgcctatcaggcgaccggctatagagtgttggcg
aaccagaaagtggtggatcgcctgctcgacgaggagtcaggcaatgtcgcggagctggaa
gcgtttatcggacgcacgattcgcttccaggtggaaaccatgtattcccaggaacaatac
gacgtggtgttgctctga
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