Pseudomonas ogarae SWRI108: HU749_008210
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Entry
HU749_008210 CDS
T07889
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HU749_008210 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pza03400
]
HU749_008210 (ung)
Enzymes [BR:
pza01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HU749_008210 (ung)
DNA repair and recombination proteins [BR:
pza03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HU749_008210 (ung)
Prokaryotic type
HU749_008210 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QXH96359
LinkDB
All DBs
Position
1843105..1843797
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AA seq
230 aa
AA seq
DB search
MTADDRIKLEPSWKQALRAEFDQPYMAELREFLRSEYAAGKEIYPPAPLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIFKELKRDLNIDIPNHGYLQSWA
DQGVLLLNTTMTVERANANAHAGKGWQHFTDRVIEVVSEHQPNLVFLLWGAHAQGKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFGRTNKFLEQHGEAPIDWRLPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgacgaccgtatcaaactcgaaccgagctggaagcaggcactgcgtgccgag
ttcgaccagccctacatggcagagttgcgcgaattcctgcgcagtgaatacgccgccggc
aaggagatttacccaccggcaccgctgattttcaatgccctcaattccacgccgctggat
aaggtcaaggttgtgatcctcggccaggacccgtaccacggcccgggccaggcccatggt
ttgtgcttctcggtacaaccgggcgtgccggcacccccctcgctggtgaacatcttcaag
gaattgaagcgcgatttgaacatcgacattccaaatcacggctacctgcaaagctgggcc
gaccagggcgtgttgctgctcaacaccaccatgaccgtggagcgcgccaacgccaacgct
cacgcgggcaagggctggcagcatttcaccgaccgggtcatcgaagtggtcagcgaacac
cagccgaacctggtcttcctgctgtggggcgcccatgcccagggcaagcagaagctgatc
gacgccaccaagcatttggtgttgacctcggtccacccgtcgccgttgtcggcttatcgt
ggtttcttgggctgcgggcattttggccggaccaacaaattcctcgagcagcatggcgag
gcgcccattgattggcgattgccgccgctttaa
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