Pseudomonas ogarae SWRI108: HU749_009340
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Entry
HU749_009340 CDS
T07889
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pza
Pseudomonas ogarae SWRI108
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pza03032
]
HU749_009340 (gyrA)
03400 DNA repair and recombination proteins [BR:
pza03400
]
HU749_009340 (gyrA)
Enzymes [BR:
pza01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HU749_009340 (gyrA)
DNA replication proteins [BR:
pza03032
]
Prokaryotic type
DNA Topoisomerases
HU749_009340 (gyrA)
DNA repair and recombination proteins [BR:
pza03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU749_009340 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QXH96576
LinkDB
All DBs
Position
2086736..2089405
Genome browser
AA seq
889 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSTVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSATRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVEEYTEGHYIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASARGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEVEGEELEGEEGEGTAFDGTLGADVDDLTGDQPLDAAADEEEPQD
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtaatcgtcgggcgggcgctgccggatgcgcgcgatggc
ttgaagcccgtgcaccggcgcgtgttgttcgcgatgagcgagctgggcaacgacttcaac
aagccgtacaagaaatctgcccgtgtcgtcggcgacgtgatcggtaagtatcacccccac
ggcgacactgccgtgtacgacaccatcgttcgtatggcccagccattctccttgcgctac
ctgctggtagacggccagggcaacttcggttccgtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcccacgaactgctggccgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgtatcccgaacctgctcgtcaacggctccagcggtattgccgtgggcatggcgacc
aacatcccgccgcacaacctcggtgaagtcatcgacggttgcctggccctcatcgacaat
cccgagctgaccgtcgatgagctgatgcaatacatcccgggtccggacttcccgaccgcc
gcgatcatcaacggtcgcgccggcatcatcgaagcctaccgcaccggccgtggccgcatt
tacatgcgtgcccgctccaccgtcgaagacatcgacaaggttggcggccgccagcagatc
gtcatcaccgagctgccgtaccagctgaacaaggctcgcctgatcgagaagatcgccgag
ctggtgaaagagaagaaactcgaaggcatcaccgagctgcgtgacgagtccgacaaggac
ggcatgcgcgtcgtgatcgagttgcgtcgtggcgaagtgcctgaggtgatcctcaacaac
ctctacgcccagacccaactgcaaagcgtgttcggcatcaacatcgtcgcgctgatcgac
ggccgtccgcggatcctgaacctcaaggacctgctggaagccttcgtacgtcaccgtcgc
gaagtggtcacccgccgtaccgtgttcgaactgcgcaaggctcgcgagcgtggtcacatc
cttgaaggccaggccgttgccctgtcgaacatcgacccggtgatcgccttgatcaaggct
tcgccaacgccgtcggaagccaaggaagcgctgatcagcaccccttgggagtcctccgcg
gtggtggcaatggtcgagcgcgctggcgccgactcgtgccgcccggagaacctcgacccg
cagtacggcctgcgcgaaggcaagtatttcctgtccccggaacaggcgcaagccatcctg
gagctgcgcctgcaccgcctgaccggcctggagcacgagaagctgctggccgagtaccag
gagattctcaaccagatcggcgagctgatccgcatcctcaacagcgccacgcgcctgatg
gaagtgatccgcgaagaattggaagtgatccgcgccgaatacggcgacgtgcgccgcacc
gagattctcgatgcgcgcctggacctgaccctgggtgacatgatcccggaagaagagcgc
gtggtgaccatttcccacggcggctacgccaagacccagccgctggccgcctaccaggcc
cagcgtcgcggcggcaaaggcaagtcggcgaccggcgtcaaggacgaggactacatcgct
cacctgctggtcgccaacagccacaccacgctgctgctgttctccagcaaaggcaaggtg
tactggctcaagacctacgagatcccggaagcatcccgtgccgcacgtggtcgtccgctg
gtcaacctgttgccgttggacgatggtgaatacatcaccaccatgctgccggtggaggaa
tacaccgaaggtcactacatcttcatggctaccgccaacggcaccgtgaagaagaccccg
ctggaatccttcagccgccagcgcagcgtcggcctgatcgccctggagctggacgaaggc
gacgtgctgatttccgccgctatcaccgacggcgagcgtgaggtcatgctgttctccgac
ggtggcaaggtcactcgcttcaaggaatccgacgtgcgtgccatgggtcgtaccgcccgt
ggtgtgcgcggcatgcgcctgccggaaggccagaagctgatttccatgctgatccccgaa
gaaggcagtcagatcctcaccgcttcggcgcgtggttatggcaagcgcacggccatcagc
gagttccctgagtacaaacgtggcggccagggtgtgatcgccatggtcagcaacgaccgt
aacggtcgtctggtcggcgctgtccaggtgctcgatggcgaggagatcatgttgatctcc
gaccagggcaccctggtgcgtacgcgagtcgccgaagtgtcgagcctgggccgtaacacc
cagggcgtgacgctgatcaagctggccagcgacgaaacgctggtagggcttgagcgagtg
caggagccatcggaagtcgaaggcgaggagctggaaggagaggaaggtgaaggcacggca
ttcgacggcaccctgggtgccgatgtcgacgacctgaccggcgaccaaccgctcgacgct
gccgcagacgaagaagaaccgcaggactaa
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