Pseudomonas zarinae: HU749_011360
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Entry
HU749_011360 CDS
T07889
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pza
Pseudomonas zarinae
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pza03000
]
HU749_011360
Transcription factors [BR:
pza03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HU749_011360
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Ortholog
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
MarR_2
HTH_23
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
QXH96958
LinkDB
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Position
2548429..2549331
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AA seq
300 aa
AA seq
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MTLKQIRAFLAVAQSLSFAVACERLHLSQSALSLTIKALEEGLGGRLFSRNTRNVALTPE
GESLLPLARRLIADWDNAEDEMRQRFTLQRGRVTLAAMPSFAGNLLPPILKTFRARYPNV
NVTVNDVINEQVLEMVRDRHVELGVAFEPMQGSSLAFTPLYLDRFVAVVPLDSPLAQRDE
IHWETLLEQPFITLQRPSTVRVMLEEHLQARGMKLPVEFESHQLATVGRMVASGLGVSAV
PALCVGQMHELGARCITLSDPVIERAIGVLTKPGHELSAAAQALFDTLRDQDLGAQLIPK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcaagcaaatccgcgccttcctcgccgtggcccagagcctgagctttgccgtg
gcctgcgagcggctgcacctgtcccagtcggcccttagcctgaccatcaaggccctggaa
gaaggcctcggcggtcgcttgttcagccgcaatacccgtaacgtggcgctgacccccgaa
ggcgaatccttgctgccactggcccgacggctgattgccgactgggacaacgccgaggac
gaaatgcgccagcgcttcaccttgcagcgcggccgtgtgacgttggcggcgatgccgtcg
tttgccggtaacctgttgccgccgatcctcaagaccttccgcgcccgctacccgaatgtc
aacgtcacggtcaacgacgtgatcaacgaacaggtgctggaaatggtgcgtgatcgtcat
gtcgaattgggcgtggcgttcgagccgatgcagggttcgtcattggcgttcacacccttg
tatctcgatcgtttcgtcgcggtggtgccgctggactcaccgcttgcccagcgcgacgaa
atccactgggaaaccctgctggagcagcccttcatcacgctgcaacgaccctccaccgta
cgggtgatgctggaggaacatctgcaggcccggggcatgaaactgcctgtggagttcgag
agccaccagttggcgaccgtcgggcggatggtcgccagcgggctgggggtgagtgccgtg
ccggcgctgtgcgtcgggcagatgcatgaactgggtgcccgctgcatcaccttgagcgat
ccggtgatcgaacgggccatcggggtgctgaccaagccggggcatgaactgtcggcggcg
gcgcaggcgttgttcgatacgctcagggatcaggatttgggcgcgcagttgataccgaag
taa
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