Pseudomonas zarinae: HU749_013965
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Entry
HU749_013965 CDS
T07889
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
pza
Pseudomonas zarinae
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
AAA_5
HTH_8
AAA_2
PAS_9
PAS
AAA
Xre-like-HTH
MLTR_LBD
Mg_chelatase
HTH_22
HTH_11
AAA_16
PAS_8
HTH_17
HTH_28
RWP-RK
Phage_CI_repr
HTH_23
HTH_Crp_2
HTH_Tnp_1_2
HTH_Tnp_ISL3
HTH_20
HTH_AraC
HTH_24
MCM
Motif
Other DBs
NCBI-ProteinID:
QXH97434
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Position
3209986..3211308
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AA seq
440 aa
AA seq
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MTHSLPPTQDLLPHPDQVQSLVSFLEHEPQPMIVLDPDYNILAANTAYLRQFGSADRPFI
GHKCYRVSHHYDVPCDQAGENCPMKKAREMRSPDRVLHIHHTPRGPEHVDVELRPILNEH
GVITAYVERLTQVRSASARPSNEGLVGSSPAFNQALLELQRVAPSMLPVLLLGESGTGKE
LFARAVHETSERAAGPFVVVDCSGLTETLFESELFGHEKGAFTGATVRKVGLVETAQGGT
LFLDEIGDVPLAMQVKLLRLIESGTYRRVGSVETLHADFRLVAATHKPLEKMLEKGEFRQ
DLYYRISVFPIHLPPLRHRLEDIGLLVDSFLQRSGIGKRRLTIDPEALMQLQRSSWPGNI
RELRNVLERAALFADDGVIHALHLPAPPVALFAPALTPAPDSRDLEQLVATFKGTRSELA
NHLGVSERTLYRRLKEQGLA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacacacagcctgccgcccacccaagacctgcttccgcatccagaccaggtgcagtcc
ctggtctcgtttctggagcacgagccccagccgatgatcgtcctcgatcccgattacaac
atcctggcggcgaacacggcttacctgcgtcagttcggcagcgccgacaggccgttcatt
ggccataagtgttatcgggtttcccaccactacgatgtgccttgtgaccaggccggtgag
aactgcccgatgaaaaaggccagggagatgcgcagtccggatcgggtcttgcacattcat
cacaccccgcgcgggcccgaacacgtcgatgtggaattgcgcccgatcctcaatgaacac
ggcgtcatcaccgcttatgtggagcgccttacccaggtgcggagcgcatcggcacggcct
agcaatgaggggctggtgggcagttcgccggcctttaatcaggcgctgttggaactgcag
cgggtagcgccctcgatgttgccggtcctgctgctgggagagtccggcacaggcaaggag
ctgtttgcccgcgccgtccatgaaaccagtgagcgggcagccgggccttttgtcgtagtc
gattgctccgggttgaccgaaaccctgttcgagagcgagctgttcggccatgaaaagggc
gcgtttaccggcgccaccgtgcgcaaggtgggcctggtggagacggcccagggcggcacg
ctgtttctcgatgagataggcgacgttcccctggccatgcaggtgaaactgttgcgactg
atcgagtctggaacctatcgccgtgtcggcagtgtggaaaccctgcacgcggatttcaga
ttggtggccgcgacccataagccgctggagaaaatgctcgagaaaggcgagttcaggcag
gacctgtactatcgcatcagcgtttttcccatccatttaccgcccttgcggcatcgcctt
gaagacatcggcttgttggtggattcgttcctgcaacgctccgggatcggtaagcgtcga
ctgaccatcgatcccgaggcgctgatgcaattgcagcggtcttcctggccgggcaacatc
cgcgagctgcgcaatgtcctggaaagagctgcgctgtttgccgacgacggcgtcattcac
gccttgcatctgcccgcgccccccgtggcgttgttcgccccggccttgacgcctgcgccc
gatagcagggacctggaacagctcgtggccactttcaaaggcacccgcagcgaactggcc
aaccacctgggcgtgagtgaacgcacgttgtaccgacggttgaaagaacaaggcctggcc
tga
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