KEGG   Pseudomonas zarinae: HU749_013965
Entry
HU749_013965      CDS       T07889                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
pza  Pseudomonas zarinae
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 PAS_4 AAA_5 HTH_8 AAA_2 PAS_9 PAS AAA Xre-like-HTH MLTR_LBD Mg_chelatase HTH_22 HTH_11 AAA_16 PAS_8 HTH_17 HTH_28 RWP-RK Phage_CI_repr HTH_23 HTH_Crp_2 HTH_Tnp_1_2 HTH_Tnp_ISL3 HTH_20 HTH_AraC HTH_24 MCM
Other DBs
NCBI-ProteinID: QXH97434
LinkDB
Position
3209986..3211308
AA seq 440 aa
MTHSLPPTQDLLPHPDQVQSLVSFLEHEPQPMIVLDPDYNILAANTAYLRQFGSADRPFI
GHKCYRVSHHYDVPCDQAGENCPMKKAREMRSPDRVLHIHHTPRGPEHVDVELRPILNEH
GVITAYVERLTQVRSASARPSNEGLVGSSPAFNQALLELQRVAPSMLPVLLLGESGTGKE
LFARAVHETSERAAGPFVVVDCSGLTETLFESELFGHEKGAFTGATVRKVGLVETAQGGT
LFLDEIGDVPLAMQVKLLRLIESGTYRRVGSVETLHADFRLVAATHKPLEKMLEKGEFRQ
DLYYRISVFPIHLPPLRHRLEDIGLLVDSFLQRSGIGKRRLTIDPEALMQLQRSSWPGNI
RELRNVLERAALFADDGVIHALHLPAPPVALFAPALTPAPDSRDLEQLVATFKGTRSELA
NHLGVSERTLYRRLKEQGLA
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgacacacagcctgccgcccacccaagacctgcttccgcatccagaccaggtgcagtcc
ctggtctcgtttctggagcacgagccccagccgatgatcgtcctcgatcccgattacaac
atcctggcggcgaacacggcttacctgcgtcagttcggcagcgccgacaggccgttcatt
ggccataagtgttatcgggtttcccaccactacgatgtgccttgtgaccaggccggtgag
aactgcccgatgaaaaaggccagggagatgcgcagtccggatcgggtcttgcacattcat
cacaccccgcgcgggcccgaacacgtcgatgtggaattgcgcccgatcctcaatgaacac
ggcgtcatcaccgcttatgtggagcgccttacccaggtgcggagcgcatcggcacggcct
agcaatgaggggctggtgggcagttcgccggcctttaatcaggcgctgttggaactgcag
cgggtagcgccctcgatgttgccggtcctgctgctgggagagtccggcacaggcaaggag
ctgtttgcccgcgccgtccatgaaaccagtgagcgggcagccgggccttttgtcgtagtc
gattgctccgggttgaccgaaaccctgttcgagagcgagctgttcggccatgaaaagggc
gcgtttaccggcgccaccgtgcgcaaggtgggcctggtggagacggcccagggcggcacg
ctgtttctcgatgagataggcgacgttcccctggccatgcaggtgaaactgttgcgactg
atcgagtctggaacctatcgccgtgtcggcagtgtggaaaccctgcacgcggatttcaga
ttggtggccgcgacccataagccgctggagaaaatgctcgagaaaggcgagttcaggcag
gacctgtactatcgcatcagcgtttttcccatccatttaccgcccttgcggcatcgcctt
gaagacatcggcttgttggtggattcgttcctgcaacgctccgggatcggtaagcgtcga
ctgaccatcgatcccgaggcgctgatgcaattgcagcggtcttcctggccgggcaacatc
cgcgagctgcgcaatgtcctggaaagagctgcgctgtttgccgacgacggcgtcattcac
gccttgcatctgcccgcgccccccgtggcgttgttcgccccggccttgacgcctgcgccc
gatagcagggacctggaacagctcgtggccactttcaaaggcacccgcagcgaactggcc
aaccacctgggcgtgagtgaacgcacgttgtaccgacggttgaaagaacaaggcctggcc
tga

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