Pseudomonas ogarae SWRI108: HU749_014265
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Entry
HU749_014265 CDS
T07889
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza00630
Glyoxylate and dicarboxylate metabolism
pza00680
Methane metabolism
pza01100
Metabolic pathways
pza01120
Microbial metabolism in diverse environments
pza01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HU749_014265 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
HU749_014265 (fdhF)
Enzymes [BR:
pza01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
HU749_014265 (fdhF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_10
Fer4_21
Fer4_6
Fer4_15
Fer4_9
Fer2
Fer4_2
Fer4_18
Fer4_16
Fer4_4
Fer4_NDSU1
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
QXH97489
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Position
3271812..3274688
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AA seq
958 aa
AA seq
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MITIFDPSSDIDLGTPARESDVQVSLTIDGREISVASGTSVMRAAALLGTTIPKLCATDS
LEAFGSCRMCLVEIDGMRGYPASCTTPVTEGMVVRTQTSKLATLRRNVMELYISDHPLDC
LTCSANGNCELQTVAGQVGLREVRYGYEGANHLDEAKDVSNPYFEYDPSKCIVCNRCVRA
CEEIQGTFALTITGRGFDSRVAAAGGDNFLDSECVSCGACVQACPTATLIDKSVVEIGQP
ERSVITTCAYCGVGCSFRAEMKGEQLVRMVPDKNGQANHGHSCVKGRFAWGYATHPDRIT
KPMIRKHIDDPWQEVSWDEAVTYAASELRRIQLKYGRDSIGGITSSRCTNEETYLVQKLV
RTAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQNFDSVMKADVILVMGANPTDAHPVF
GSQLKRRLRQGARLIVIDPRRIDLVDSPHARAELHLQLRPGTNVAMLNALGHVIATEGLI
DQPFVEARCEAADFARWRDFVSLPENSPEVLGPVCGVPAEQIRAAARLYATGGNAAIYYG
LGVTEHSQGSTSVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRH
ISNETVRAQFEQAWNVTLQPDPGLRIPNMFEAALDGTFKALYCQGEDIAQSDPNTQHVTA
ALSALECVIVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRISRVRKVMDPLAGKAD
WEATIALADALGYKMHYNHPSEIMDEIARLTPTFTRVSYAELDRHGSLQWPCNDAAPDGT
PTMHIDQFVRGKGRFMLTGYVPTDEKVNGRYPLLLTTGRILSQYNVGAQTRRTDNVAWHE
EDRLEIHPTDAENRGIVDEDWVGIGSRAGQTVLRAKVTERVAPGVVYTTFHFPESGANVI
TTDNSDWATNCPEYKVTAVEIVRVSQPSEWQKRYQAFSDEQSRLLRERRHAEKAEVRR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgatcactatcttcgatcccagcagcgatatcgacctgggcaccccggcgcgcgaaagc
gacgtgcaggtcagcctgaccatcgatgggcgcgaaatcagcgtcgcctccggcacctcg
gtcatgcgtgccgcggccttgctcggcaccaccattcccaaactctgcgccaccgacagc
ctggaagccttcggctcctgccgcatgtgcctggtggaaatcgacggtatgcgcggctat
cccgcgtcctgtaccacgccggtaaccgaaggcatggttgttcgcacgcaaacctccaag
ctcgccacgctgcggcgcaacgtgatggagctgtacatttccgaccacccgctggactgc
ctgacatgctcggccaatggcaactgcgaattgcagaccgtggcgggtcaggtgggcctg
cgcgaagtgcgctacggctacgaaggcgccaatcacctggatgaagccaaggacgtttcc
aacccgtatttcgagtacgacccgagcaagtgcatcgtctgcaaccgctgcgtgcgtgcc
tgcgaggaaatccagggcaccttcgccctgacgatcaccggacgcggttttgactctcga
gtggcggcggccggcggtgacaacttcctcgattccgaatgcgtttcctgcggcgcctgc
gtgcaggcgtgcccgacggcgacactgatcgacaagagcgtcgtggagatcggtcagccg
gagcgcagtgtcattaccacttgcgcctactgcggcgtgggttgctcgttccgcgccgag
atgaaaggcgaacaactggtgcgcatggtcccggacaagaacggccaggccaaccacggt
cactcctgcgtcaagggccgcttcgcctggggctacgccacgcacccggaccgcatcacc
aagccgatgatccgcaagcacatcgacgacccgtggcaggaagtcagttgggacgaggcg
gtcacttacgccgccagcgagttgcgccggatccagctcaagtacgggcgcgactccatc
ggcggcatcacctccagccgctgcaccaacgaagaaacctacctggtgcagaaactggtg
cgcaccgcgttcggcaacaacaacgtcgacacctgtgcccgcgtctgccattcgcctacc
ggttacggcctcaagcagaccttgggcgagtccgccggcacccagaacttcgactcggtg
atgaaagccgacgtcatcctggtgatgggcgccaacccgactgacgcgcacccggtgttc
ggctcccagctcaagcgtcgcctgcgccagggcgcacggctgatcgtcatcgacccacgg
cgcatcgacctggtggattcgcctcacgcccgtgccgagctgcacttgcaactgcgtccg
ggcaccaacgtggcaatgctcaacgcgttgggccatgtgattgccaccgaaggcttgatt
gaccagccttttgtcgaggcacgctgcgaggcggcggacttcgctcgctggcgcgatttc
gtcagcctgccggaaaactcccccgaggtgctgggcccggtgtgtggcgtgcctgccgag
cagatccgcgccgccgcacggctctacgccaccggcggcaacgcggccatctactacggc
ctcggtgtcaccgagcacagccagggcagcacctcggtcatgggcatcgccaacctggcc
atggccaccggcaacatcggtcgtgaaggtgtcggggtgaacccgctgcgtggacagaac
aacgtccagggctcctgcgacatgggctcgttcccccacgagctgccgggctatcggcac
atttccaacgaaaccgtacgcgcccagttcgaacaggcgtggaacgtcaccctgcaaccc
gatccgggcctgcgtatcccgaacatgttcgaggcggccctggatggcaccttcaaggcc
ctttattgccaaggtgaggacatcgcccagagcgaccccaacacccagcatgtgacggcc
gcgctgtccgctttggaatgcgtgatcgtccaggacatcttcctcaacgagacggccaag
ttcgctcacgtgttcctgccgggcagctcgttcctggagaaggacggtaccttcaccaac
gccgaacgccgcatctcccgcgttcgcaaggtgatggacccgttggccggcaaggccgat
tgggaagccaccatcgccctggccgacgccctgggctacaagatgcactacaaccatcct
tcggaaatcatggatgaaatcgcccgcctgacgccgactttcacccgcgtcagctacgcc
gaactggatcgtcatggcagcctgcaatggccttgtaacgatgccgcaccggacggtacg
ccgaccatgcacatcgaccagttcgtgcgcggcaagggccgtttcatgctcaccggctac
gtgcccaccgatgagaaggtcaacggccgctacccgctgctgctgaccaccggacgcatc
ctcagccagtacaacgtcggcgcccagacccgacgcaccgacaacgtggcctggcacgag
gaggaccggttggagattcacccaaccgacgccgagaaccgcgggatcgtcgacgaagac
tgggtgggtatcggcagtcgtgccgggcagacggtactgcgcgcgaaggtgaccgagcgg
gtggcaccgggcgtggtctacaccacgttccacttccctgaatcgggtgccaacgtgatc
accaccgacaactccgactgggccaccaactgcccggaatacaaggtgacggcggtcgag
atcgtgcgggtcagccagccttcggaatggcagaagcgctaccaggccttcagtgatgaa
caaagccgcttgctcagggaacgtcgccatgccgagaaagccgaggtgcgtcgatga
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