Pseudomonas ogarae SWRI108: HU749_016455
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Entry
HU749_016455 CDS
T07889
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
pza
Pseudomonas ogarae SWRI108
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pza03000
]
HU749_016455
Transcription factors [BR:
pza03000
]
Prokaryotic type
Helix-turn-helix
GntR family
HU749_016455
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
MarR_2
HTH_24
HTH_IclR
DUF6880
HTH_Crp_2
TrmB
HTH_27
Fe_dep_repress
HTH_CodY
HTH_11
GMT-wHTH
HTH_36
HTH_5
HTH_41
Ribosomal_S25
MarR
FliX
HTH_29
HTH_28
PLU-1
HTH_23
HTH_20
TFIIE_alpha
BLACT_WH
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
QXH92461
LinkDB
All DBs
Position
3789563..3790315
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AA seq
250 aa
AA seq
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MKRLPLDDSFKVNRNPVTLREIVLDKLRSAIMNFQLLPGDRLVERDLCDRLGVSRTSVRE
ALRHLESEGLVEFADAKGPRVAIITLADAGDIYELRCVLEGLIVQLFTLRAKAKDIKALE
KALEENRKALKDGELQQVIDSVQGFYDVLLEGSGNHVAATQLRQLQARISYLRATSVSQE
NRRGNSNQEMERMVEAIKSGDPLAAHQACVDHVRAAAKVALEYLKRKQEETGEIPEIIPP
IALKEPRIGR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcctgccactcgacgacagcttcaaggtcaatcgcaaccccgttaccctgcgc
gagatcgtgctggataaactgcgaagcgccatcatgaacttccagcttctgccgggcgat
cgcctggtcgaacgcgatctgtgcgatcgcctgggcgtgagccgcacgtcggtacgcgaa
gcgctgcgccacctggaatccgaaggccttgtggaattcgccgatgccaaaggaccacgg
gtggcgatcatcaccctggccgatgccggcgacatctatgaattgcgttgcgtgctcgaa
ggcttgatcgtccagctcttcaccctgcgggccaaggccaaggacatcaaggcgctggag
aaagcccttgaggagaaccgcaaggccctcaaggatggcgagctgcaacaggtcatcgat
tcggtgcagggcttctatgacgtcctgctcgaaggctccggcaaccatgtcgccgccacc
cagctgcgccagttgcaggcgcgtatcagctatttgcgagcgacctcggtgtcccaggaa
aaccgtcgcggcaacagcaaccaggaaatggaacgcatggtcgaggcgatcaagagcggc
gatcccctggccgcccatcaggcctgcgtcgaccacgtgcgcgccgccgccaaggtcgcc
ctggaatacctcaagcgcaagcaggaagagaccggtgaaatccccgagatcatcccgccc
atcgccctcaaagaaccgcgcataggtcgctag
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