KEGG   Pseudomonas ogarae SWRI108: HU749_017375
Entry
HU749_017375      CDS       T07889                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
pza  Pseudomonas ogarae SWRI108
Pathway
pza03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pza00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HU749_017375 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pza02044]
    HU749_017375 (gspD)
Secretion system [BR:pza02044]
 Type II secretion system
  General secretion pathway protein
   HU749_017375 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: QXH92639
LinkDB
Position
complement(4000486..4002846)
AA seq 786 aa
MKGARYPRHWRKAAPLLVLALSACNSTPPASQPPLLVDSELGIPLGSTQRSGDALLDRQR
AQDLREHKPAVRHQVDLTTRAREPRSNVPARTPLGDQPVTLNFVEADIQAVVRALSRSTG
QQFLVDPRVKGNLTLVSEGQVPAYQAYDMLLAALRMQGFSVVDVGGVAQVVPEADAKLLG
GPIYSADKPAGNGMLTRTFRLQYENAVNLIPVLRPIVSPNNPINAYPGNNTIVVTDYAEN
LSRVAQLIEGIDTPSAIDTDVVPVHNGIAVDIAQMVADLLETQGGDQTQKINVIGDPRSN
SIIIRAGSPERTELARNLIYKLDNAQNNPSNLHVVYLRNAQAGKLAQALRGLLTGESEGE
GSDNSRSVLSGMGASTNGQSGQSSSGDGTSSTTGGSASTSGNGYAQGSNGTTSASTKNEQ
STAFSAGGVTIQADATTNTLLISAPDPLYRNLREVIDLLDQRRAQVVIESLIVEVGEDDA
SEFGVQWQTGNLGGSGVIGGVNLGGTGLNLNGKTSIDVLPQGLNLGLVNGTVDIPGIGKI
LDLKVLARALKSKGGTNVLSTPNLLTLDNEAASIFVGQTIPFVSGSYVTGGGGTSNNPFQ
TVTREEVGLKLNVRPQISEGGTVKLDIYQEVSSVDNRASSTTGIVTNKRAIDTSILLDDG
QIMVLGGLLQDGYSQSNDAVPWLSTIPGIGALFRNERRQITKTNLMVFLRPYIIRDTAAG
RGITLNRYDFMRRAQGLLQPERSWALPDMQAPQLPASARAIPGAAPVSLQTPRAVIKAVP
IEGGTP
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgaaaggggccagatacccacgtcattggcgcaaggctgcaccgctgttggtgctggcg
ttgagcgcgtgcaacagcacgccaccggcgtcgcagccaccgttgctggtggacagcgag
ctgggcattccgttgggaagcacccagcgcagcggcgatgcattgctcgatcgccaacgg
gcccaggacctgcgtgaacacaagccagcggtgcggcatcaggtcgacctcaccacccgt
gcccgtgagccgcgcagcaatgtgccggcgcgcacgcccttgggcgatcaaccggtgacg
ctgaatttcgtcgaagcggatatccaggcggtggtgcgggccttgtcccgttccaccggc
caacagtttctggtggacccgcgggtcaagggcaacctgacgctggtatccgaaggccag
gtcccagcctaccaagcctacgacatgctgctggccgcgttgcgcatgcaaggcttcagc
gtggtggacgtcggcggcgtggcccaggtggtgccggaggccgatgccaagctgcttggg
gggccgatctacagcgccgacaaaccggccggcaacggcatgctgacccgcacctttcgc
ctgcaatatgagaacgcggtgaacctgatcccggtgctgcgcccgatcgtgtcgccgaac
aatccgatcaatgcctacccgggcaacaacaccattgtcgtcaccgattacgccgagaac
ctgtcgcgggtggcgcagctcatcgaaggcatcgacaccccgagcgccatcgacaccgac
gtggtgccggtccacaacggcatcgcggtcgatatcgcgcagatggtcgctgacctgctg
gaaacccagggcggcgaccagacccagaagatcaacgtgatcggcgacccgcgctccaat
tccatcatcattcgcgccggcagccccgagcgcacggagctggcgcgcaacctgatctac
aagctcgacaacgcccagaacaacccgagcaacttgcatgtggtgtacctgcgcaacgcc
caggccggcaaactggcccaggccctgcgcggcttgctcaccggggaaagcgaaggcgag
ggcagcgacaattcgcgctcggtgctcagtggcatgggcgccagcaccaatggccagagt
gggcagagcagcagtggcgatggcaccagcagcaccaccggcggcagtgcttcgaccagc
ggcaatggctacgcccagggcagcaacggcacgacttccgcttcgacgaaaaacgaacag
agcactgccttcagcgctggtggcgtgaccatccaggccgacgccaccaccaacaccttg
ctgatctccgcgccggacccgctgtaccgcaacctgcgggaagtcatcgacctgctcgac
cagcgtcgggcccaggtggtgatcgagagcctgatcgtcgaggtcggcgaggacgacgcc
agcgagttcggtgtgcaatggcagaccggcaacctcggtggcagcggcgtgatcggcggg
gtcaatcttggcggcacagggctcaacctcaatggcaagaccagcatcgatgtattgcct
caaggcctgaaccttggcctggtcaacggcaccgtggacattcccggtatcggcaagatt
ctcgacctcaaggtcctggcccgggccttgaagagcaagggtggcaccaatgtactgtcg
acgcccaacctgctgaccctggacaacgaagcggcgagcatttttgtcggccagaccatt
ccctttgtcagcggtagctacgtcaccggcggcggtggtaccagcaacaacccgttccag
accgtgacccgcgaggaggtgggtttgaagctcaatgtccggccgcagatttccgaaggc
gggacggtcaagctcgacatctatcaggaggtcagcagcgtcgacaatcgcgcttcgagc
accaccggcatcgtcaccaacaagcgcgccatcgacaccagcattctgctcgacgacggg
cagatcatggttctgggtgggttgctgcaggatggctacagccagagcaatgacgcggtg
ccatggttgtcgaccattccggggatcggcgcgctgtttcgcaacgaacggcggcagatc
accaagaccaacctgatggtgttcctgcggccctacatcatccgcgacacggcggcgggc
cgcggcatcaccctcaaccgctacgacttcatgcgccgcgcccagggcctgttgcaaccg
gaacgcagttgggccctgccagacatgcaagccccgcaactgccggcctcggcccgggcg
atcccgggcgctgcgccggtgagcttgcagacacccagggcggtgatcaaggcggtgcct
atcgaggggggcactccttga

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