Pseudomonas ogarae SWRI108: HU749_017520
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Entry
HU749_017520 CDS
T07889
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pza
Pseudomonas ogarae SWRI108
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pza03400
]
HU749_017520
DNA repair and recombination proteins [BR:
pza03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU749_017520
Archaeal homologous recombinant proteins
HU749_017520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QXH92665
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All DBs
Position
4034670..4035914
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AA seq
414 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLDWLLRQLTQEKPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQNANLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDV
ERLLLPLPDAKGKVKAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANSKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSISYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYQHQILDITLDGETLVKVEPRLIPRAVNLQRLGPVPLADLLVQL
KELPDIDLLADVQRQPWLEVRVRLDEPQPDLRHQVETALQGKAVRLVRIGAEYAGNGGAG
SADDGSALVELDQLSPQELFSRAWQDTYGNEVDEQTLKDFAVLLQDVQMESEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctggggcaaaacctgcacggccaggaacgc
gatttcgaacacgcctgtttcctcgactggctgctgcgtcagctgacccaagaaaaaccc
gacgtgctgctgatcgccggcgacatcttcgacaccgtcaacccgccggtcaaagcccag
gaacggctgtacgatttcatcgtcagcgcccatgaacaaaacgccaacctgaccatcgtg
atgatcgccggcaaccacgactccggttcgcggatcgagctgcctgcgccactgatgcgg
cgcttgcgcacccatgccctgggccgggtgctgtggctggacgacggccaactggatgtc
gagcgcctgctgctgccgttgcccgatgccaagggcaaggtcaaggcgtggtgcctggcg
ctgccgttcctgcgccccgccgaagtcaccggtgcgcaactgggtgacgactacctgcga
ggcatcggccaggtgcatgagtggctgatcgccgcggccaacagcaagcgcaagaaaggc
caggcgctgatcgccatcagtcatgcgcacatggccggcggttcggtgtccgaggactcc
gagcgcagcctgatcatcggcaacgccgaggccctgcccgccagcctgttcggcccgagc
atcagctacgtcgccctcggccatttgcacaagccgcagaaggtcaacggtgaagagcgt
atccgctacagcggttcgccgatcccgctgtcattttcggagatcggctatcagcatcag
atcctcgacatcaccctggacggcgaaaccctggtcaaggtcgagccgcgcctgatccca
cgggccgtcaacctgcaacgcctgggcccggtgccgctggccgatctcctggtgcaactc
aaggaactgcccgacatcgacctgttggccgatgtccagcgtcaaccctggctggaagtg
cgggtgcgcctcgacgaaccgcagccggacctgcgtcaccaggtggaaaccgcactgcaa
ggcaaggccgtacgcctggtgcggatcggcgccgagtacgccggcaacggcggcgccggc
agtgccgatgacggcagcgcgctggtggagctggatcaactcagcccgcaggagttgttc
agccgcgcctggcaggacacctacggcaacgaagtggacgaacagaccctcaaggacttt
gccgtgctgttgcaagacgtgcagatggagagcgagcagccatga
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