Pseudomonas zarinae: HU749_017525
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Entry
HU749_017525 CDS
T07889
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pza
Pseudomonas zarinae
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pza03400
]
HU749_017525
DNA repair and recombination proteins [BR:
pza03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU749_017525
Archaeal homologous recombinant proteins
HU749_017525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
RsgA_GTPase
nSTAND3
AAA_15
MMR_HSR1
AAA_22
AAA_25
cobW
Motif
Other DBs
NCBI-ProteinID:
QXH92666
LinkDB
All DBs
Position
4035911..4039552
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDVDGDIATGDPRTLLRRGTGDGFAEVDFRGIDGRRYRARWEANRAREKA
GGKLQASRQSLRDLDNDQLLASQKGEYKTQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKAKQAKDSHRQLQDQATGVTPLAPEARAELDQRF
NDAQQLLKAQQGQLKQLEQQHTWLRDLGVLQDEHASAAEQLQQAQADWNALADERLKLVR
LEQLAPQRHQFIRQAELSRQLDPLAVQIQQLTQQQLNLHDQQAELEKSLGAAQLALAAAR
QHSSDSAPLLRQAFEEQSTLARLARDASQGAERQEQAQQACTEGQRTIDTLLEQQRQVAE
RLQRIAGALEQSTHLAPLSDAWNAYRDRLQQLMLIGNRLNQGQAELATLEQGATRAAEEL
ASRRQDLEVLYKEAGAEPEAVAEQIQLLGTLLQDNRKQLRAFEDLTRLWASQQELDKRGA
ELEQRQQRALQERDRLVREGGEAKAELTIAEQTLTVTRELLERQRLARSESVEQLRAQLQ
TEQPCPVCGSVEHPYHQPEALLENLGRFDETEEANARKAVDLLNEKVIDLRAQYSGVIAQ
LKELKQQQEQLASQQQSLAPSLEAHPLSAQLLAQEANKRDAWLTQQNSQLTLRISQDEQR
QTALLTLQQDAARMAQRLREAEAASHQASQHLGNQQQELARDRQRLDEELSHFSTLLPAD
TLQALRSEPAATFLQLDRQIAQRLEQLEQQRDELGEQLQRQQTVEKEQDRQQTRLQQLEA
ARLQFSALSEQQQACQEKLTQLLGEHTSAEEWQQQLDQRLEQTRDAEATANQQLQQLRND
LVQLAAELKARQEQAQALDHERQALAAGIAQWRTTHPELDDAALEALLGLDEQHVSQLRQ
RLLNSEKAIEQAHVLLTEREQRLQNHQAQHNGNLAPEQLAQALTELQTQFAASEQRCAEL
RAEQAEDQRRQNANQALAQQIEQAYTEYQRWARLDALIGSATGDRFRKLAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTVEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgcgatccgcctcaagaacctggcgtccctggccgggccgtttgaaatc
gatttcaccgccgaacccttggccagcgccggcctgttcgccattaccggccccacgggc
gccggcaagagcacgttgctcgacgccttgtgcctggcgctgttcggcgccgtgccgcgc
ctcaacaacaccggccgcgacgccaaggtgccagacgtcgatggcgacattgccacgggc
gacccacgcacgctgttgcgccgtggcaccggcgatggctttgccgaagtggattttcgc
ggcatcgacgggcgccgctatcgggcccgctgggaagccaatcgcgcccgggaaaaggcc
ggcggcaagttgcaagccagccgccagagcctgcgggacctggacaacgatcaactgctg
gcgagccagaaaggcgaatacaagacccagctcgaagcggccctgggccttaacttcgaa
cagttcacccgtgccgtgctgctggcccagagcgagttcagcgcgttcctcaaggccgat
gacaatgatcgcagcgaactgttggaaaaactcaccgacactgccctgtatacccgcctc
ggccgccgcgccttcgacaaggccaagcaagccaaggacagccaccggcagttgcaagac
caggccaccggtgtcacgccgctggcccccgaggcccgggccgagctggaccagcgtttc
aacgacgcccagcaactactcaaggcccaacaggggcaactcaagcaactggagcagcag
cacacctggctgcgcgacctgggcgtattgcaggatgaacacgccagcgccgccgaacag
ctgcaacaggcccaggccgattggaacgccctggccgacgaacgcctgaaactggtccgc
ctggaacaactggcgccccaacgccatcagttcatccgccaggccgaactgagccgacag
ctcgaccccttggccgtgcagatccagcagcttacccagcagcagctcaatctccatgac
cagcaggccgaactggaaaaaagcctgggcgccgcgcaactggcgctggctgcggcccgg
caacacagcagcgacagcgcgccgttgctgcgccaggcctttgaagagcaaagtaccctg
gcccgtctcgccagggacgccagccagggcgccgagcgccaggaacaggcgcaacaggcc
tgcaccgaaggccagcgcaccatcgacaccttgctcgaacagcaacggcaggtggccgag
cgcttgcagcgcatcgccggcgcgttggaacaaagcacacacctggccccgctgagcgat
gcctggaacgcctatcgcgatcgcctccaacaactgatgctgatcggtaatcgcctgaac
cagggccaggccgaactcgccacactggaacaaggcgccacccgcgccgccgaggaattg
gccagccgtcggcaagaccttgaagtgctctacaaggaagctggcgccgagccggaggca
gtggccgaacagatccagttactcggcaccctgctgcaagacaaccgcaagcaattgcgt
gccttcgaagacctgacccggctgtgggccagccagcaagagctggacaaacgtggcgcc
gagcttgaacaacgccagcaacgagcgttgcaggaacgtgaccggctggtgcgcgaaggc
ggcgaagccaaggccgaactgaccattgccgaacagaccctgaccgtcacccgcgagctg
ctggagcgccagcgcctggcccgcagcgaaagcgtcgagcaactgcgcgcacagttacag
actgaacagccctgccccgtgtgcggcagcgtcgagcatccttatcatcagcccgaagcc
ctgctggaaaacctcgggcgctttgatgaaaccgaagaggccaacgctcgcaaagccgtc
gacctgctcaatgaaaaagtcatcgacctgcgggcgcaatacagcggggtcatcgcccag
ctcaaggaactcaaacagcagcaggaacagctcgccagccagcaacagagcctggcgccc
agccttgaagcccacccgttgtcggcgcaactgctggcccaggaggcgaacaagcgcgac
gcctggctgacccagcagaacagccaactgaccctgcgcatcagccaggacgaacaacgg
caaaccgccctgctgaccctgcagcaggacgccgcgcgcatggcgcagcggctacgtgaa
gccgaggcagccagccatcaggcgtcacagcacctgggcaaccagcagcaggagctggcc
cgcgatcgccagcgcctggacgaggagctgagccacttcagcaccctgctacccgctgac
accctgcaggccttgcgcagcgagcccgccgcaaccttcctgcaactggaccggcagatc
gcccagcgcctggagcaactggaacagcaacgcgacgaactgggcgaacagctccagcgc
cagcagaccgtggagaaagagcaggaccgccagcagacccgcctccagcaactggaagcg
gcccgcctgcaattcagcgccctgagcgagcaacaacaagcctgtcaggagaaactcacg
caactgctcggcgagcacaccagcgccgaagagtggcagcaacaactcgaccagcgcctg
gaacagacgcgggatgccgaggcgacggccaatcagcagttgcagcaattgcgcaacgac
ctggtgcaactggccgccgaactcaaggcccgccaggaacaggcccaagccctggaccac
gaacgccaggcgctggccgccggtatcgcgcaatggcgcaccacccatccggaactggac
gatgctgccctcgaagccctgctcggccttgacgagcaacacgtcagccagttgcgccag
cgcttgctcaacagcgaaaaagccatcgaacaggcccacgtactgctcaccgaacgcgag
cagcgcctgcaaaaccaccaggcccagcacaacggcaacctggcgcccgaacaactcgcc
caagccctcaccgagctgcaaacccaatttgccgccagcgaacagcgctgcgccgaactg
cgcgccgaacaggccgaggaccagcgccggcagaacgccaaccaggccctggcccagcag
atcgaacaggcctacaccgaataccagcgctgggcacgcctcgatgccctgatcggttcg
gccaccggcgaccgcttccgcaagctggcccaggcctacaacctcgacttgctggtgcac
cacgccaatgcccaactgcggcaactggtacgccgctaccggctcaagcgcggcggcagc
atgctcgggctgctggtgatggacacggaaatgggcgatgaactgcgctcggtgcactcg
ttgtccggtggtgaaaccttcctggtttccctcgccctggcattgggcctggcctcgatg
gcgtccagcacactcaagatcgaatcgctgttcatcgacgaaggcttcggcagcctcgac
cccgagtcgctgcaactggcgatggacgccctcgacggactgcaggcccagggccgcaag
gtcgcggtgatttcccacgtacaggaaatgcacgagcggattccggtgcagatccaggtg
cgtcgccagggcaacggtttgagcacggtggaggtaaaatga
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integrated database retrieval system
