Pseudomonas ogarae SWRI108: HU749_018965
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Entry
HU749_018965 CDS
T07889
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza00020
Citrate cycle (TCA cycle)
pza00480
Glutathione metabolism
pza00720
Other carbon fixation pathways
pza01100
Metabolic pathways
pza01110
Biosynthesis of secondary metabolites
pza01120
Microbial metabolism in diverse environments
pza01200
Carbon metabolism
pza01210
2-Oxocarboxylic acid metabolism
pza01230
Biosynthesis of amino acids
pza04146
Peroxisome
Module
pza_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pza_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HU749_018965
09102 Energy metabolism
00720 Other carbon fixation pathways
HU749_018965
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HU749_018965
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HU749_018965
Enzymes [BR:
pza01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
HU749_018965
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Gene cluster
GFIT
Motif
Pfam:
IDH
CAMP_factor
PDZ_CPAF_rel
Motif
Other DBs
NCBI-ProteinID:
QXH92942
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Position
4353919..4356144
Genome browser
AA seq
741 aa
AA seq
DB search
MPTRSKIIYTFTDEAPALATYSLLPIVEAFTASADIAVETRDISLAGRILASFPEQLGDK
AVADHLAELGDLAVTPEANIIKLPNISASVPQLQAAIKELQAQGYALPDYPETVSSDAEK
DARARYDKIKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAADSKSHVAHMSTGD
FYGSEKAALIDAAGSVKIELIAQDGTATVLKEKTTVQAGEILDCAVMSKNALRDFIAAEI
EDAKQKGVLLSVHLKATMMKVSDPIMFGQIVAEFYKDALAKHAQVLEQIGFNLNNGIGDL
YARIKALPAEQQAQIEADIQAVYAARPSLAMVNSDKGITNLHVPSDVIVDASMPAMIRDS
GKMWGTDGQLHDTKAVIPDRCYATIYQAVIEDCKQHGAFDPTTMGSVPNVGLMAKKAEEY
GSHDKTFQIKVDGVVRVSDSNGRPLLEQSVEAGDIFRMCQTKDAPIQDWVKLAVNRARAS
STPAIFWLDPMRAHDGVVIEKVQTYLKDYDTAGLDIRIMSPVDAMKFTLARTREGKDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLLEENFLR
WDSLGEFLALAASLEHLGVTYNNPKALVLAKTLDQATGEFLDRNKSPSRKVGGIDNRGSH
FYLTLFWAQALAAQDDDAALKAQFASLAKTLTDNEEKIVAELNAVQGKPVDIGGYYFANP
ELTSKAMRPSNTFNAAIAALV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccgctcgaagatcatctataccttcaccgacgaagcgcccgccctcgccacc
tattcgctgctgccgatcgtcgaagcctttaccgcttcggccgatatcgccgtggaaacc
cgcgatatctccctcgcagggcgcatcctggccagcttccccgagcaactgggtgacaaa
gccgtagccgaccacctcgccgaactgggcgacctggccgttacgcctgaagccaacatc
atcaagctgccgaacatcagcgcctcggtgccgcaactgcaggccgcgatcaaggaattg
caggcccagggctacgcactgccggactacccggaaaccgtgagcagcgacgccgagaaa
gacgcccgcgcccgctacgacaagatcaagggcagcgccgtgaacccggtcctgcgcgaa
ggcaactccgatcgtcgcgcgccgctgtcggtcaagaactacgcccgcaagcacccgcac
aaaatgggagcctgggcagccgactccaagtcccacgtggcccacatgagcaccggcgat
ttctacggcagcgaaaaagccgccctgatcgacgccgccggcagcgtgaaaatcgagctg
atcgcccaggacggcactgccactgtcctgaaggaaaaaaccaccgtacaagccggtgag
atcctcgactgcgccgtgatgagcaaaaacgccctgcgtgacttcatcgccgctgaaatc
gaagacgccaagcaaaaaggcgtcctgctgtcggttcacctcaaggccaccatgatgaag
gtctccgacccgatcatgttcggccagatcgttgccgagttctataaagacgccctggcc
aagcacgcacaagtgctggagcagatcggcttcaacctgaacaacggcatcggcgacctg
tacgcccgcatcaaggccctgccggccgagcagcaggcgcagatcgaagccgacatccag
gcggtctacgcggcacgcccatccctggcgatggtcaactccgacaaaggcatcaccaac
ctgcacgtgccgagcgacgtcatcgtcgacgcctcgatgccggccatgatccgtgactcc
ggcaagatgtggggcaccgacggccagctgcacgacaccaaggccgtgatcccggatcgc
tgctacgccaccatctaccaggcggtgatcgaagactgcaagcaacacggcgccttcgac
ccaaccaccatgggcagcgtgccgaacgttggcctgatggccaagaaagccgaagagtac
ggctcccacgacaagaccttccagatcaaggtcgacggcgtggtccgtgtttcggacagc
aacggccgccccctgctggagcagagcgtcgaagctggcgacatcttccgcatgtgccag
accaaagacgcgccgatccaggactgggtcaaactggccgtcaaccgcgcccgcgccagc
agcaccccggcgatcttctggctggacccgatgcgcgcccatgacggcgtcgtgatcgag
aaagtccagacttacctgaaggactacgacactgccggcctggacatccgcatcatgtcg
ccggtcgacgcgatgaagttcaccctggcccgcacccgcgaaggcaaggacaccatctcg
gtgaccggcaacgtactgcgcgactacctgaccgacctgttcccgatcatggaactgggc
accagcgccaagatgctgtcgatcgtgccgctgatgaacggcggtggcctgttcgaaacc
ggcgctggcggctcggcacccaagcacgtgcagcagttgctggaagaaaacttcctgcgc
tgggattccctgggcgagttcctggccctggccgcgtccctcgagcacctgggcgtgacc
tacaacaacccgaaagcactggtgctggccaagaccctggaccaggctaccggtgagttc
ctggaccgcaacaagtcgccttcgcgcaaggtcggcggcatcgacaaccgcggcagccac
ttctacctgaccctgttctgggcccaggcactggccgcccaggacgacgacgctgccctc
aaggctcagttcgcttccctggccaagacattgaccgacaacgaagaaaaaatcgttgcc
gaactcaatgccgtccaaggcaagcccgtggacatcggcggttactacttcgccaacccg
gaactgaccagcaaggccatgcgcccgagcaacaccttcaacgcggcgattgctgcgctg
gtgtaa
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