Pseudomonas ogarae SWRI108: HU749_021425
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Entry
HU749_021425 CDS
T07889
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza00541
Biosynthesis of various nucleotide sugars
pza01100
Metabolic pathways
pza01250
Biosynthesis of nucleotide sugars
Module
pza_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HU749_021425 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pza01005
]
HU749_021425 (kdsB)
Enzymes [BR:
pza01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HU749_021425 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
pza01005
]
Lipid A
HU749_021425 (kdsB)
BRITE hierarchy
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
NTP_transferase
DUF2064
DUF4913
Motif
Other DBs
NCBI-ProteinID:
QXH93389
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Position
complement(4895876..4896640)
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AA seq
254 aa
AA seq
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MTATFTVVIPSRFASTRLPGKPLLLIAGKPMIQHVWEQACKSSAQRVVVATDDARIVEVC
KGFGAEVVLTREDHNSGTDRLAEVAAKLGLAADAIVVNVQGDEPLIPPSVIDQVAANLAA
HTEARMATLAEPIEDVQTLFNPNVVKVVSDLNGLALTFSRATLPWARDAFAQSRDVMPEG
VPYRRHIGIYAYRAGFLQDFVAWGPCWLENTEALEQLRALWHGVRIHVADALIAPPTGVD
TAEDLERVRRLLEA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaacctttaccgttgtcattccgtcgcgtttcgcttcgacgcgtctgcccggc
aagccgttgctgttgattgccggcaagccgatgatccagcacgtctgggagcaggcttgc
aaaagcagcgcccagcgtgtggtggtggcgaccgacgatgcgcgcatcgtcgaggtctgc
aaaggctttggtgccgaagtcgtcctgacgcgtgaagaccataattccggcactgaccgc
ctggcggaggtcgcggcgaaactcggtcttgctgccgacgcgatcgtcgtcaatgtgcaa
ggtgacgagccgttgatcccgccgagcgtgatcgatcaggtcgccgccaacctcgcggcc
cacaccgaggcacgcatggccaccctggccgagccgatcgaggatgtgcagacgctgttc
aaccccaacgtggtcaaggtggtcagcgacctcaatggcctggcgttgaccttcagccgc
gcgacgttgccctgggcgcgggacgcatttgcccaaagccgtgacgtgatgccggaaggc
gtgccataccgccgtcacatcggtatctatgcctaccgcgccggcttcctccaggacttc
gtcgcctggggcccgtgctggctggaaaacactgaagccctggaacagctgcgtgccctg
tggcacggcgtgcggatccacgtcgccgatgcgctgatcgccccgccgaccggtgtcgac
accgccgaagacctcgagcgcgttcgtcgcctgctggaggcttga
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