Pseudomonas ogarae SWRI108: HU749_021805
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Entry
HU749_021805 CDS
T07889
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza00020
Citrate cycle (TCA cycle)
pza00640
Propanoate metabolism
pza00660
C5-Branched dibasic acid metabolism
pza00720
Other carbon fixation pathways
pza01100
Metabolic pathways
pza01110
Biosynthesis of secondary metabolites
pza01120
Microbial metabolism in diverse environments
pza01200
Carbon metabolism
Module
pza_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pza_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HU749_021805 (sucD)
00640 Propanoate metabolism
HU749_021805 (sucD)
00660 C5-Branched dibasic acid metabolism
HU749_021805 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
HU749_021805 (sucD)
Enzymes [BR:
pza01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
HU749_021805 (sucD)
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Gene cluster
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXH93459
LinkDB
All DBs
Position
complement(4971571..4972455)
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AA seq
294 aa
AA seq
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MSVLINKDTKVICQGITGSQGSFHTQQALEYGTKMVGGVTPGKGGTEHLGLPVFNTVKDA
VAATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDELGITLI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKANVTKPVVSYIAGVTAP
PGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTGWEMKK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcctgatcaataaagacaccaaggttatctgccagggtattaccggttcgcaa
ggtagtttccacacccagcaagccctggaatacggcaccaagatggttggcggcgtaacg
ccaggcaaaggcggcaccgagcacctgggcctgccagtgttcaacaccgtgaaagacgct
gtagccgccactggcgccaccgccagcgtgatctacgttccagctcctttctgcaaggac
tccatccttgaagcagcgttcggcggcatcaagctgatcgtctgcatcaccgaaggcatc
ccgaccatcgacatgctggaagccaaggtcaagtgcgacgagctgggtatcaccctgatc
ggccctaactgcccaggcgtgatcaccccaggcgaatgcaagatcggcatcatgccaggt
cacattcacttgccaggcaaggtcggtatcgtttcccgttccggcaccctgacctacgaa
gctgtgaagcagaccactgacgccggtttcggtcagtcgacttgcgtcggcatcggcggt
gacccgatcccaggctcgaacttcatcgacatcctgaagctgttccaggaagacccgaag
accgaagcgatcgtcatgatcggtgagatcggcggttcggctgaagaagaagcggctgcc
tacatcaaggccaacgtgaccaagccggttgtttcctacatcgctggtgtgactgctcct
ccgggcaagcgcatgggccatgctggcgcaatcatctctggcggcaaaggcactgcagac
gagaaattcgctgctctgcaagacgcaggcgtgaaaaccgtgcgttcgctggcagacatc
ggcaaggccctggccgagctgactggctgggaaatgaagaagtaa
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