Pseudomonas ogarae SWRI108: HU749_021835
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Entry
HU749_021835 CDS
T07889
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza00020
Citrate cycle (TCA cycle)
pza00190
Oxidative phosphorylation
pza00650
Butanoate metabolism
pza00720
Other carbon fixation pathways
pza01100
Metabolic pathways
pza01110
Biosynthesis of secondary metabolites
pza01120
Microbial metabolism in diverse environments
pza01200
Carbon metabolism
Module
pza_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pza_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pza_M00149
Succinate dehydrogenase, prokaryotes
pza_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HU749_021835 (sdhA)
00650 Butanoate metabolism
HU749_021835 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
HU749_021835 (sdhA)
00720 Other carbon fixation pathways
HU749_021835 (sdhA)
Enzymes [BR:
pza01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HU749_021835 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
Thi4
FAD_binding_3
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
QXH93465
LinkDB
All DBs
Position
complement(4980443..4982215)
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AA seq
590 aa
AA seq
DB search
MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVYELDHMGMPFSRTEQGRIYQRP
FGGQSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTVFLNEYYAVDLVKNQDGAF
VGVIAICIETGETTYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPNGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAITQNAEGVDEIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALSDGIEYDDATDANIEAALARLSALNERTEGEDVATLRRELQNCMQNYFGVFRTGE
YMQKGIAQLAQLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDFEDRDDENWLCHTLYFPGDKRVTKRAVNFSPKTVPTFEPKIRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattccaacgatttctttcgacgccatcatcattggtggtggcggtgccggc
atgcgcgcggcgctgcaactggcacagggcggtcacaagactgccgtgatcaccaaggtc
ttcccgacccgttcgcacactgtttccgcccagggcggcatcacctgtgccatcgcttcg
gccgacccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactat
atcggtgaccaggatgctatcgaatacatgtgtcaggaaggcccggctgccgtttacgaa
ctggaccacatgggcatgcctttctcgcgtaccgagcaaggtcgtatctaccagcgtccg
ttcggtggccagtccaaggactacggcaagggcggtcaggctgcacgtacttgcgcagcg
tccgaccgtaccggtcacgcactgctgcacaccctttaccagggcaacctgaaagccggt
accgtgttcctgaacgagtactacgctgtcgatctggtgaagaaccaggatggcgctttt
gtcggcgtgatcgcgatctgcatcgaaaccggcgaaaccacctacatccgtgccaaggcc
accgtactggcgaccggcggtgcaggtcgtatctatgcctccaccaccaatgccctgatc
aacaccggtgacggcgtcggcatggccctgcgtgcaggcgtaccggtgcaagacatcgaa
atgtggcagttccacccaaccggcatcgccggcgccggtgtactggtcaccgaaggttgc
cgcggtgaaggcggttacctgatcaacaagcacggcgagcgtttcatggagcgttatgct
ccgaacgccaaggaccttgccggtcgtgacgtggttgcccgttcgatggttaaagagatc
atcgccggcaacggctgtggcccgaatggcgaccacgtgatgctcaagctcgaccacttg
ggcgaggaagtgctgcacagccgcctgccaggtatctgcgaactgtccaagaccttcgct
cacgtcgacccggtcgttgcgccggttccagtggttccaacctgccactatatgatgggc
ggcgttgccaccaacattcatggccaggcaatcacccagaacgccgaaggcgtggacgaa
atcatccctggcctgttcgcagtgggtgaagtggcgtgcgtatcggtccacggtgcaaac
cgcctgggcggcaactcgttgctcgacctggtggtcttcggtcgcgctgctggcctgcac
ctggaaaaagccctgtccgacggtatcgaatacgacgatgccaccgacgccaacatcgaa
gccgccctggcgcgtctgtccgctctgaacgagcgtaccgaaggcgaagacgtggcgacc
ctgcgtcgcgaattgcaaaactgcatgcagaactacttcggtgtattccgtaccggcgaa
tacatgcagaagggtattgcccagctggcgcaattgcgtgaacgaatcgccaacgtgaag
atcaacgataagtcgcaggcgttcaacactgcccgtatcgaagcgctggaattgcagaac
ctgctggaagtggctgaagctaccgccattgctgccgaagtacgtaaagagtcccgcggc
gctcacgcccgtgaagacttcgaagatcgtgacgacgaaaactggctgtgccacaccctt
tacttcccgggtgacaagcgcgtgaccaagcgtgctgtgaacttctcgccgaagactgtt
ccgacttttgaacctaagattcggacttattaa
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