Pseudomonas ogarae SWRI108: HU749_022380
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Entry
HU749_022380 CDS
T07889
Name
(GenBank) sugar-binding protein
Organism
pza
Pseudomonas ogarae SWRI108
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Collagen
Mit_ribos_Mrp51
Motif
Other DBs
NCBI-ProteinID:
QXH93564
LinkDB
All DBs
Position
5102341..5107389
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AA seq
1682 aa
AA seq
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MTTSYVVQSNAFNFMSFLSASVDPRTGQYTIAIDLPELKSNALCGPAVPLKLVFNPLNTL
DSGFGVGWNFNLSQFTPHDSILALSTGETFKVTGSGTTPRIQEKKLDSFHFFNDGNDVYR
VVHKAGLIETLRVGGSGDKEVALPVQIHAPSGHKVDLAYVGFNGGQRLASISDDLGKLLQ
INRSDDHTQVEVLLHPEAGPSGTPLARFELRLNPKRQVAEIILPTEERASWRFDYQEVRG
LNCIKEVKTPVGGREAIEYLDSGHPYPGNSGRGNLPRVTRHQLFPGFEQPPMEVCYEYTL
ENFIGNGTNINWESNGLDQLYKVARTYTYGSTAKHKVAGAVVRTVQRTFNSFHLLTEETT
TQGDCVQRVLTTYHTIEGDFEQQPAYFQLPKTVEKRWELLSDVTQARSETLATTYDNFGN
LLEERQHNGIRTAYEYYPVGGYVDDEGDVHCPADPQDFVRNLRSQTVYPAEGHEGQAPIH
RTRYRYVELPPLEKSLDEGFLAVGNEDLTQIVNSTEITLQSTSRQYLEMPGKPFLHGRPD
RQEETLYDKDGKGKTSAVSWCYSLVDGELGARTLHQTVQTLTGYNGSQQITTSQVSRFNG
ETVLQEDIDGVKTTYRYDALGRLLEERVAVGTPVEASQHFSYSLTSADGQQAEQVLTDIK
GVKTRTLFDGANRIIEEQRQRLDRNGNPVWRQTYTALHDALGRQVSETTCDWLDDTPLPL
TSQLAYDDWGEVCRATDPDGVAQVSERRFDNNRQVICTWQAHTERPDVRTQRSETHYNLF
DKPDTVRRLDALDDTAGSLGYVYDGYGNCIQEIETLRDPQSEELEYLQRTTKYVYDVWGR
ILRTVLPNGDSIERAFADYSISELPTLLQVTPGNAAQPVVVSGTQQFDDLERLTERKVGQ
RSERYRYQDGHVQIHQRITPANQTLTYSYNLPLTQQPSAIKVAEGPESTYEYDPLSAAIT
QAINDQGRCDYEYTLEGYLASERWRDSNSVDQTTRHYTSLQGRQLRREDDGAVPTQYQYD
AAGRLEHIIQGNPDDPHGLKADFVYNHDGLLERSTSTDLASGQRLVTELEYDEHGREIKR
TLKVDGEADRVLSLVWQDDDQLRSRCLEKAGQTLLEEHFKYDARNRLTQHSCFGEALPTD
QYGNAITKQVFRFDALDNIERCTSFFADTDNSSNDARFTYDEDDKCQLREVSHSHDTYPR
LQTFDYDADGHQLNDGQGRRLRYDNLGRLVEVRSADNATSLINYRYDGHDQLVGVRHGSE
PEALRFYQGYQLCYTLQNDVLTQFLYDGDRALGQQIPGATDQAMLLLTDAANSVIGENRV
DGLYDTAYSAYGERREDNGLKGLLAFAGEVREAVIGWYLLGRGYRAYDPGLMRFHSPDSL
SPFGVGGLNPYGYCQGNPIAWRDPSGHRAQGVTPYRDPDPGYNDPVEQPKAPGIGIAQWI
GLGLAALFLVVSVVAMPWSAPATIGVTASYVVGIVGIGVQFAGVGLQAYGTIKQDETWSA
IGGGVGVVGGLLAGTGIYATTAAVNAAKAAKAAAELSKATALGTSKIASGVLQVATGATG
TTVAIGATGRRGPSGATGRRGPSGPRGRPGRPGRVTIIHHFAPSAQNTSSLGTSTKSAAP
GSVGTAPDPTLLGGNNVPAPPSSPQTTTNVKGGWSTTPAGGIVPNADYNKQAELATQSRI
RR
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtcttatgtggtccaatccaacgctttcaacttcatgagtttcctctccgcc
agtgtcgacccgcgcaccggtcagtacaccattgccatcgacttgccggaactcaagtcc
aacgccctctgcggccccgctgtaccgctgaagctggtgttcaacccactcaacaccctg
gattcaggattcggcgtcggttggaatttcaacctgtcccagttcacgccccacgacagc
atccttgccctgtccaccggcgaaaccttcaaggtcaccggcagcggcaccacgcccagg
atccaggaaaagaaactcgacagcttccacttcttcaacgatggcaacgatgtctatcgg
gtcgtgcacaaagccggtttgatcgaaaccctgagggtcggcggcagcggcgataaggag
gtggccttgcccgtgcagatccatgccccctccgggcacaaggtcgatctggcttacgtt
ggcttcaacggcggccaacgcctggcatcgatcagcgatgatttgggcaaactgctgcag
atcaaccgctccgacgaccacacacaggtcgaggttctcctgcaccccgaggctggccca
agtggcacgccgctggcgcgcttcgagctcaggctcaatcccaagcgtcaagtggccgag
attatcctgcccaccgaggagcgtgccagttggcgcttcgattaccaggaggtgcgcggc
ctgaactgcatcaaggaggtcaagacaccggtcggcgggcgtgaagccatcgagtacctc
gactcgggtcatccctacccgggcaacagtgggcgggggaacctgccaagggtcacccgt
catcagctctttcccggcttcgagcaaccaccgatggaagtgtgctacgagtacaccctg
gaaaacttcatcggtaacggcaccaacatcaattgggagagcaacggcctggaccaactg
tacaaggtcgcccgcacctacacctacggctccaccgccaagcataaagtggctggggca
gtggtgcgcacggtgcagcgtaccttcaacagttttcacctgctcaccgaagaaaccacc
acccagggcgattgcgtgcagcgggtgctcaccacttaccacaccatcgagggggacttc
gaacagcagccggcgtatttccagttgcccaagaccgtggagaagcgctgggaactcctc
agtgacgtcactcaggctcgcagcgaaacgttggccaccacttacgacaacttcggtaac
ctgctggaggagcggcagcacaatggcatccgcactgcgtatgaatactatccggtcggc
ggttacgtggacgatgagggtgacgttcattgtcccgccgatccgcaggactttgtacgc
aacctgcgcagccaaacggtgtacccggccgagggccatgaaggccaggcgccgatccat
cgtacccgatatcgctatgtagaactgccgccgctggagaaaagcctggatgagggcttc
ctggcagtgggcaacgaagatctgacgcaaattgtaaactccaccgaaataacattgcag
agcactagccgccaatatctcgagatgcccggcaaacctttcctgcatggtcgcccggat
cgccaggaagagaccctctatgacaaggatggcaaggggaaaacctccgccgtcagttgg
tgctatagcctggtcgatggggagctgggggccagaacattgcaccagaccgtacagact
ctgaccgggtacaacggcagccaacagatcaccacatcacaggtctcccgcttcaacggc
gaaaccgtgctgcaagaggatatcgatggcgtcaaaaccacctaccggtatgacgccttg
ggccggttgctggaagagcgcgtggcggtgggcacaccggtcgaggcctctcagcatttc
agctacagcctgacgtcagcggacggtcagcaagccgagcaagtgctaaccgacatcaaa
ggtgtcaagacccgaacgttgttcgatggtgccaaccggatcatcgaagaacaacgccaa
cggttggacagaaacggcaaccctgtctggcgccagacctacaccgccctgcacgacgcc
ttggggcgccaggtcagtgaaacgacctgcgactggcttgacgacacacccttgcccttg
accagccaattggcctatgacgattggggcgaggtctgccgagccaccgatcccgacggc
gtagcccaggtcagcgagcgccggttcgacaacaaccgacaggtcatttgcacctggcaa
gcgcacaccgaacggcccgatgttcgtacccaaagaagcgaaacccattacaacctgttt
gataaacccgatacggtccgacgtctggatgccctggacgatacggcaggcagcttggga
tacgtctacgacggctatgggaattgcattcaagagatcgaaacactgagggatccgcaa
agcgaagagttggaatatctgcagcgaaccaccaaatacgtgtacgacgtctggggccgc
atattgcgtaccgtgttaccgaacggcgacagtatcgagcgcgcctttgccgactacagc
atcagcgaattacccacgctcttgcaggtcactcccggtaacgctgcgcaacctgttgtc
gtgtccggcacacagcagtttgatgatcttgaacgcctgaccgaacgcaaggtgggtcaa
cgtagcgagcgctatcgctaccaggatgggcatgtacagattcaccaacgaatcacgccc
gcaaaccagacactgacctacagctacaatctgccgctgacccagcaaccctcggccatc
aaggtggccgaaggccccgagtccacctatgaatatgacccgttgagcgccgccatcacc
caggccatcaacgatcagggtcgatgcgactacgagtacacgctggaaggttatctggcc
tcggagcggtggcgagacagcaacagcgtcgatcaaacgacgcgtcactacacctcattg
caaggcagacaactgcgtcgcgaagacgatggcgccgtgccgacgcagtaccagtacgat
gctgcgggcagactggagcatatcatccagggtaaccctgacgacccgcatggcctcaaa
gcagacttcgtctacaaccacgacggccttctcgaacgcagcaccagcacggacctggcc
agcggtcagcgcctggtcaccgaactggaatacgacgaacatggtcgcgaaatcaagcgc
accctgaaggttgacggtgaagccgacagggtattgtccctggtctggcaggacgacgat
caattgcgcagccgttgcctggaaaaagccggccagacgctgctggaggaacacttcaaa
tacgatgcacgtaaccgcctgacccaacacagctgtttcggcgaagcattaccgaccgac
cagtacggcaatgccattaccaagcaggtgtttcgctttgacgccctagacaacattgaa
cgttgcaccagcttttttgccgatacagataacagcagcaacgatgctcgcttcacctat
gacgaagatgacaaatgccagttgagagaagtcagccatagtcacgatacgtaccccagg
ctgcaaacttttgactatgacgccgatggccatcagctcaacgacggacaaggccggcgg
ctgcgctatgacaatctggggcgtctggtggaagtgcgcagtgctgacaatgcaacatcg
ctgatcaactaccgctatgacggccatgaccagttggttggggtgcgtcacggcagcgaa
ccggaggccctgcgcttctatcagggttaccaactctgctacaccctgcaaaacgacgtg
ctgacccagtttttgtacgacggtgatcgcgcattgggccagcaaataccaggagccacc
gatcaagcgatgctgttgctgaccgatgcagccaacagcgtcataggtgaaaaccgcgtc
gacgggctgtacgacaccgcatacagcgcctatggcgagcgccgtgaggacaatggcctg
aaggggttgctggcatttgccggggaggtgcgcgaggccgtcatcggctggtatttactg
ggacgcggctaccgcgcctatgacccggggctgatgcgtttccatagccccgactccctc
agtcctttcggggtcgggggtctgaacccctacggttattgccagggtaacccgatcgcc
tggcgcgaccccagcggccatcgggcccagggtgttacgccgtatcgagacccagaccca
ggttacaacgatccggtcgaacaacccaaggcccccggcataggcatcgctcaatggatt
ggtttgggcctggcagcattgttcctggttgtctcggtagtggcgatgccttggagcgcc
ccggctaccattggtgtgaccgccagctatgtagtcggtattgtcgggataggtgtgcag
tttgcaggggtggggttacaggcttatggcacgatcaagcaggacgaaacctggtctgcc
attggtggtggagtgggcgtagtcggcggactgcttgcagggactgggatatatgcgaca
actgccgctgtgaatgcagccaaagcagccaaagcagccgccgaattatctaaggccacc
gctttaggtacgtcgaagatagcatcgggagtgttacaagtggctactggagctactgga
accaccgtagccatcggagctactggacgtcgtggaccttctggagctactggacgtcgt
ggaccttctggacctcgtggacgtcctggacgtcctggaagggtaaccattatccatcac
ttcgctccaagcgctcaaaacacctcatcgctcggaacatctaccaagtcggctgcacct
ggaagtgtagggaccgcccctgaccctacattgctggggggaaacaacgtcccagcacct
ccttcgtcgccgcagactacaacgaacgttaagggtggttggagcacaacgcctgccggc
ggaatagtaccaaacgctgactacaacaagcaggcagagctagccacgcaatccagaata
cggcgatag
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