Pseudomonas ogarae SWRI108: HU749_023100
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Entry
HU749_023100 CDS
T07889
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HU749_023100 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pza03019
]
HU749_023100 (groL)
03110 Chaperones and folding catalysts [BR:
pza03110
]
HU749_023100 (groL)
03029 Mitochondrial biogenesis [BR:
pza03029
]
HU749_023100 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pza04147
]
HU749_023100 (groL)
Enzymes [BR:
pza01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HU749_023100 (groL)
Messenger RNA biogenesis [BR:
pza03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HU749_023100 (groL)
Chaperones and folding catalysts [BR:
pza03110
]
Heat shock proteins
HSP60 / Chaperonin
HU749_023100 (groL)
Mitochondrial biogenesis [BR:
pza03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HU749_023100 (groL)
Exosome [BR:
pza04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HU749_023100 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HU749_023100 (groL)
Exosomal proteins of breast cancer cells
HU749_023100 (groL)
Exosomal proteins of colorectal cancer cells
HU749_023100 (groL)
Exosomal proteins of bladder cancer cells
HU749_023100 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QXH93695
LinkDB
All DBs
Position
complement(5253792..5255435)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGDSARKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVKELKALSKPCADTKAIAQVGTISANSDNSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPETMTAELDGPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESTTLEHLGNAKRVILSKENTTVIDGAGVETDIQARVLQIRQQVADTSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAISELKGDNDDQNVGIQLLRRAVEAPLRQIVANSGDEPSVVVDKVKQGSGNYGYNA
ATGEYGDMIEMGILDPAKVTRSALQAASSIASLMITTEAMIAEIKEDAPAGGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgattccgcccgcaagaaaatgctcgccggtgtc
aacgtcctggctgacgcagtaaaagcgaccctgggcccgaaaggccgtaacgtgatcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtttccgtagccaaagaaatc
gagctgaaagaccgcttcgaaaacatgggcgcgcaactggtcaaagacgttgcctcccgt
gccaacgatgacgccggcgatggcaccaccaccgctaccgtcctggctcaatcgatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggcgaccatcgccattgtcaaagagctcaaagccctgtccaagccatgcgctgac
accaaggcaatcgctcaggtcggcaccatctccgccaactccgacaactccatcggcgac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtcggttgtagaaggcatgcagttcgaccgtggctacctg
tccccgtacttcgtcaacaagccagagaccatgactgccgagctggatggtccgctgatc
ctgctggtcgacaagaagatctcgaacatccgcgaaatgctgccagtgctggaagccgtt
gccaaagccggccgcccactgctgatcgtggctgaggacgttgaaggcgaagccctggcg
accctggtcgtgaacaacatgcgtggcatcgttaaagtcgcagccgtcaaggctccaggc
tttggcgaccgtcgcaaggccatgctgcaggacatcgccgtactgaccggcggtaccgtt
atctccgaagagatcggcctgagcctggaaagcaccaccctggagcacctgggtaacgcc
aagcgcgtgatcctgtccaaggaaaacaccaccgtgatcgacggtgccggcgttgagact
gacatccaggctcgcgttctgcagatccgtcagcaagtggccgacacttcgtccgactac
gaccgtgaaaaactgcaagagcgcctggccaagctgtccggcggcgttgcagtgatcaag
gttggtgccggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcgacccgcgcagccgtcgaagaaggcgtggtacctggcggcggcgtggcactggtt
cgcgctctgcaggctatctccgagctcaaaggcgacaacgatgaccagaacgtgggcatc
cagttgctgcgtcgcgctgtagaagcaccgctgcgccagatcgttgccaactccggcgac
gagccaagcgttgtggtcgataaggtcaagcagggttcgggtaactacggttacaacgct
gctaccggcgaatacggcgacatgatcgaaatgggtatcctggacccggccaaagtgact
cgttcggctctgcaagcggcttcgtcgattgccagcctgatgatcaccaccgaggcgatg
atcgctgaaatcaaggaagacgctccagctggcggcggtatgccagacatgggcggcatg
ggtggcatgggcggcatgatgtaa
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