Pseudomonas ogarae SWRI108: HU749_023295
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Entry
HU749_023295 CDS
T07889
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K17061
two-component system, response regulator AauR
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU749_023295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pza02022
]
HU749_023295
Two-component system [BR:
pza02022
]
Other families
AauS-AauR (acidic amino acids utilization)
HU749_023295
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_2
AAA
Motif
Other DBs
NCBI-ProteinID:
QXH93733
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Position
5292969..5294297
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AA seq
442 aa
AA seq
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MNHDLSVLIVEDDPHVLLGCQQALSLEDIPCIGVGSAEEALERVDDNFAGIVISDIRLPG
IDGLELLTRLKARDRSLPVVLITGHGDISMAVGAMQKGAYDFMEKPFSPERLVDVARRAL
EQRSLAREVSSLRRQLAERDSLEGRIIGRSPAMQHLRALIANVADTSANVLIEGETGTGK
ELVARCLHDFSRRHDKQFVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHADGG
TLFLDEVESMPLPLQIKLLRVLQERTLERLGSNQSVAVDCRVIAATKSDLDEMGRVGQFR
SDLYYRLNVVTLELPPLRERREDILQLFKHFLQQSSLRFDRTVPELDNQTLSNLMSHDWP
GNVRELRNVAERYALGLPAFKRAGASGGSQGLAFAEAVEAFERNLLVDALQRSGGNLTQA
SLELGMAKTTLFDKVKKYGLSH
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgacctgagcgtactgatcgtcgaagacgacccccacgtcctgctgggttgc
cagcaggccttgagcctggaagacattccctgcatcggcgtgggcagcgccgaagaggcg
ctggagcgtgtcgacgataactttgccggcatcgtcatcagtgacattcgcctgccgggc
atcgacggcctggaactgctgacccgcctcaaggcacgggaccgcagcctgccggtggtg
ctgatcaccggccacggcgacatctccatggccgtcggtgccatgcaaaaaggcgcctat
gacttcatggagaaacccttctcccctgaacgcctggtagacgtcgcccgccgcgccctg
gagcagcgcagcctcgcccgggaagtgtcatcgctgcgtcggcaattggccgaacgcgat
tccctggaaggccggatcattggccgctcgcccgccatgcagcacctgcgcgcgctgatc
gccaacgtcgccgacacctcggccaacgtgctgatcgaaggcgaaaccggcaccggcaag
gaactggtcgcccgttgcctgcatgacttcagccgacgccacgacaagcagttcgtcgca
ctgaactgcggcggcctgccggagaacctgttcgaaagcgagattttcggccacgaagcc
aatgcctttaccggcgccggcaaacgccggatcggcaagatcgaacacgccgacggtggc
acgctgtttctcgacgaagtggaaagcatgcccctgcccttgcagatcaagttgctgcgc
gtgctgcaggaacgcaccctcgaacgcctgggttcgaaccagagcgtggccgtggattgc
cgggtaatcgccgccaccaagtccgacctggacgaaatgggccgggtcgggcagttccgc
agcgacctgtattaccgcctcaacgtggtaaccctggaactgccgccactgcgcgagcgg
cgcgaagacatcctgcaactgttcaagcactttctccagcagtcgtccctgcgctttgac
cgcacggtgccggagctggacaaccagaccctgtcgaacctgatgagccacgactggccg
ggcaacgtgcgcgaactgcgcaacgtcgccgagcgttacgccctgggcctgccggcgttc
aagcgcgccggtgccagcggtggtagccagggcctggcctttgccgaagccgtggaagcc
ttcgagcgcaacctgctggtggacgccctgcaacgcagcggtggcaacctgacccaggcc
agcctggaactgggcatggccaagaccacactgttcgacaaagtcaaaaaatatggcctg
agccattaa
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