Pseudomonas ogarae SWRI108: HU749_023495
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Entry
HU749_023495 CDS
T07889
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza01501
beta-Lactam resistance
pza02020
Two-component system
Module
pza_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU749_023495
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HU749_023495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pza02000
]
HU749_023495
01504 Antimicrobial resistance genes [BR:
pza01504
]
HU749_023495
Transporters [BR:
pza02000
]
Other transporters
Pores ion channels [TC:
1
]
HU749_023495
Antimicrobial resistance genes [BR:
pza01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
HU749_023495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
QXH93768
LinkDB
All DBs
Position
5331965..5333221
Genome browser
AA seq
418 aa
AA seq
DB search
MRVMKWSMIALAVSASTSQFAMASSQEESKGFIEDQSLTVLTRALYMNRDFKNELNTRQS
YREEAGVGVRAIYESGFTQGTVGVGADAFAFGSARFDGGTGRAGNGLFAQDSDGNLEETQ
SKIGGAVKFRLSDTVLKYGNQFTTSPVFSTDDSRLLPEVATGTLITSKEIKGLELSAGHF
NAISSQTGMGDDGLGLKSADIAGATYQFTDNFVAGVAASDVEDHYKKKYLNLNYTLPINE
DQSLNFDFNGYDSKDQGQKLSGDVDNRIWSLAAAYAIGAHKFTLAHQRSTGDTGYAYGVD
GGGTIFLANSIQYSDFNGQDERSWQARYDLNMKTYGVPGLSFMTRYVTGDNISTADGEAK
EHEWDFETKYVLQSGPAKDLSFRVRSAFYRTNTSYTTASGNRDNNDFRFIVEYPLSIL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgcactggctgtatcggccagtacctcgcagttc
gcaatggcctcttcccaggaagaatccaagggttttattgaagatcagagcttgactgtt
ctgacccgtgcgctgtacatgaaccgtgatttcaagaacgaactaaacactcgtcaaagt
tatcgtgaagaagccggcgttggcgtccgcgccatctacgagtcgggcttcacccaaggt
accgttggtgtaggcgctgacgccttcgcattcggctccgctcgtttcgacggtggcact
ggtcgcgctggtaacggcctgttcgctcaggacagtgatggcaacctggaagaaacacaa
tcgaagattggcggcgcggttaagttccgtctgtccgacaccgttctgaaatatggcaac
cagttcactaccagcccggttttctctactgacgacagccgtctgctgccagaagttgct
accggtacgctgatcaccagtaaagaaatcaaaggcttggagctgagcgctggtcatttc
aacgccatcagttcgcaaactggcatgggcgatgacggccttggcctgaaatccgctgac
attgccggtgcaacctaccagttcaccgacaatttcgtagccggcgtagcggcttccgac
gtcgaagatcactacaaaaagaaatacctgaacctgaactacacgttgccgatcaacgaa
gatcagtcgctgaacttcgacttcaacggttatgacagcaaggaccaaggccagaagctc
agcggcgacgttgacaaccgtatctggtccctcgcagcagcctatgccatcggcgcccac
aagttcaccctggctcaccagcgctccaccggtgataccggctatgcgtacggtgttgac
ggcggcggtaccattttcctcgccaactccatccagtactccgacttcaacggtcaggac
gagcgttcctggcaggcgcgctacgacctgaacatgaaaacttacggcgttcctggcctg
agcttcatgacccgttatgtcaccggtgataacatttccaccgctgatggcgaagcaaaa
gagcacgaatgggacttcgaaaccaagtacgttctgcaaagcggtccagccaaagacctg
tcgttccgtgttcgtagcgctttctaccgcaccaacacctcttacaccaccgccagtggc
aaccgagacaacaatgacttccgcttcatcgtcgaatacccactgagcatcttgtaa
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