Pseudomonas ogarae SWRI108: HU749_024690
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Entry
HU749_024690 CDS
T07889
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza00260
Glycine, serine and threonine metabolism
pza00460
Cyanoamino acid metabolism
pza00630
Glyoxylate and dicarboxylate metabolism
pza00670
One carbon pool by folate
pza00680
Methane metabolism
pza01100
Metabolic pathways
pza01110
Biosynthesis of secondary metabolites
pza01120
Microbial metabolism in diverse environments
pza01200
Carbon metabolism
pza01230
Biosynthesis of amino acids
pza01240
Biosynthesis of cofactors
pza04981
Folate transport and metabolism
Module
pza_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HU749_024690
09102 Energy metabolism
00680 Methane metabolism
HU749_024690
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HU749_024690
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HU749_024690
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HU749_024690
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HU749_024690
Enzymes [BR:
pza01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HU749_024690
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QXH93988
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Position
5602941..5604179
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AA seq
412 aa
AA seq
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MSLQNFDPAIARLIDRERNRQETHLELIASENYVSEEVLQAQGSVLTNKYAEGYPGKRYY
GGCKVVDEIENLAIERARKLFNCEYVNVQPHSGSQANQAVFLAVLEPGDTILGMSLAHGG
HLTHGASVNFSGKIYRAFSYGLDTETETLDYEEMEALAREHRPKMIIAGASAYSRTIDFQ
RFRKICDEIGAYLMVDMAHYAGLIAAGVYPSPVGIADFITSTTHKTLRGPRGGLILAKAQ
YAALLDKTIFPVYQGGPLMHVIAAKAVAFNEALGDGFKHYQQRVIDNARVMADVLTRRGL
RVVSGGTDCHMFLLDLRSMNITGKDAEALLESAHITLNKNAIPNDPQKPAITSGIRIGTP
ALTTRGFGEAECAEVANLIADLLEQPDNAARLENTRRRVMHLCECFPVYLLR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcaaaatttcgaccccgccattgcccgcctgatcgaccgcgagcgcaaccgc
caggaaacccacctggagctgatcgcttcggaaaactatgtcagcgaggaagtgctccag
gcccagggttccgtgctcaccaacaaatacgccgaaggctatccgggcaagcgttactac
ggcggctgcaaggtcgtcgatgaaatcgagaacctggccatcgaacgcgctcgcaagttg
ttcaactgcgaatacgtcaacgtgcagccgcactccggctcccaggccaaccaggcggtt
ttcctggcggtacttgaacccggcgacaccatcctgggcatgtccctggcccatggcggc
cacctgacccacggcgcctcggtgaatttttccggcaagatctaccgggcattttcctat
ggcctggacacggaaaccgaaaccctcgactacgaagaaatggaagccctggccagggaa
caccggccgaagatgatcatcgccggggcctcggcctattcgcggaccatcgacttccag
cgctttcgcaagatctgcgatgaaatcggcgcctacctgatggtggacatggcgcactac
gccgggttgatcgctgccggcgtgtacccgtcgccggttggcatcgccgacttcatcacc
tctaccacccacaagaccttgcgcggcccgcgcggcggtctgatcctggccaaggcgcaa
tatgccgccctgctcgacaagacgattttcccggtgtaccagggcggcccgctgatgcac
gtcatcgccgccaaggccgtggcattcaacgaagccttgggcgacgggttcaagcattac
cagcagcgggtgatcgacaacgcccgcgtcatggccgacgtcctgacccgacgcggcttg
cgggtggtgtccggcggtaccgactgccacatgttcctgctcgatctgcgctcgatgaac
atcaccggcaaagacgccgaggcgctgctggaaagtgcccacatcaccctgaacaaaaac
gcgatccccaacgatccgcagaaaccagccatcaccagcggcattcgcatcggcacgccg
gcactgaccacgcgcggctttggcgaagcggaatgtgccgaagtggcgaacttgatcgcc
gacctgctggaacagccggacaacgcggcgcgtctggaaaacacccgacgccgagtgatg
catctgtgcgagtgctttccggtgtatctgttgaggtaa
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