Pseudomonas ogarae SWRI108: HU749_025000
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Entry
HU749_025000 CDS
T07889
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pza
Pseudomonas ogarae SWRI108
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pza03400
]
HU749_025000 (phrB)
Enzymes [BR:
pza01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HU749_025000 (phrB)
DNA repair and recombination proteins [BR:
pza03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HU749_025000 (phrB)
Prokaryotic type
HU749_025000 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QXH94050
LinkDB
All DBs
Position
5666002..5667453
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AA seq
483 aa
AA seq
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MQLIWLRSDLRLHDNTALAAAAAQGPCVAVYLTSPEQWRAHDDAPCKIDFWLRNLGALSA
ALDELNIPLLIRAAAHWHQAPHVLLKLCRELNVGAVHVNEEYGLNETRRDAEAARALNDQ
GIEFHSHLDQLLFKPGSVLTKTGNYFQVFSQFRKVCYARLHFSLPSLVATPVRQAPTGIT
RDPVPTQVDGFAPPSEALRALWPAGETEARRRLDTFVDQHIDDYQGERDFPAKPGTSQLS
AYLVAGVVSPRQCLHAALQANQGEFESGSAGVVTWVNELLWREFYKHILVGYPRVSRHRA
FRPETEALAWRKAPAELEAWKQARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMQHLIDGDLAANNGGWQWSASTGTDSAPWFRIFNPLSQSEKFDREGLFIK
RWLPELNDLDRQQVHSPNTQGGLFGAVNYPAPIVDLSQSRARALAAFRNLPARQDAAFEG
MGD
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgacttgcgcctgcacgacaacaccgctcttgcagca
gccgcagcccaaggaccctgcgtggcggtgtacctgaccagcccggaacaatggcgcgcc
catgatgacgcaccgtgcaagatcgatttctggttgcgcaacctaggcgcgttgagcgcg
gccctggacgaattgaacatcccactgctgatccgcgccgcagcgcattggcaccaggcc
ccacacgtgctgctcaagctgtgtcgagaactgaatgtcggcgccgtgcatgtcaacgaa
gagtacggcctgaatgaaacgcgacgcgacgccgaggccgcccgcgcattgaatgaccag
ggcattgagtttcacagtcacctcgaccaattgctgttcaagcccggcagcgtgctgacc
aagaccggcaactatttccaagtgttcagccagttccgcaaggtctgctacgcccgtctg
catttctcattgccgagcctggtcgccacaccggtccggcaggctcccaccggcattacc
cgcgacccggtgccgacgcaagtcgatgggttcgcaccgcccagcgaagcgctacgagcg
ctctggcctgccggggaaaccgaagcccggcggcgcctggacacctttgtcgaccagcac
atcgacgattaccaaggcgagcgggactttcccgccaagcccggcaccagccagctatcg
gcctatctggtggctggggtggtgtcaccgcgtcagtgcctgcacgccgcgctgcaagcc
aaccaaggtgaattcgaaagcggaagtgccggtgttgtgacctgggtcaatgaattgctc
tggcgtgagttctataaacacattctcgtgggctatccacgcgtgtcgcgccatcgcgcg
ttccgccccgaaaccgaggcgctggcctggcgcaaagcccccgcagaactggaggcctgg
aaacaagcgcgcaccggcctgccgattatcgatgcggccatgcgtcagttgctggagacc
ggctggatgcacaaccgcttgcggatggtcgtcgccatgttcctgaccaagaacctgttg
atcgattggcgcgaaggtgagcgctttttcatgcagcacctgatcgacggcgacctggcc
gccaacaatggcggctggcagtggagcgcctccaccggcaccgattcggccccctggttc
cgcatcttcaacccgttgagccagtcggaaaaatttgaccgcgaaggcctgttcatcaaa
cgctggctacctgaactgaacgatctggacaggcaacaggtccatagcccaaatacccag
ggcggcttgtttggtgccgtgaattatccggcaccgattgtcgacttgagccaatccagg
gcgcgtgcgctggcagcattcagaaacctgccggcgcgacaggacgcagcctttgaaggc
atgggcgattag
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