KEGG   Pseudomonas ogarae SWRI108: HU749_025345
Entry
HU749_025345      CDS       T07889                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
pza  Pseudomonas ogarae SWRI108
Pathway
pza02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pza00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HU749_025345
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pza02022]
    HU749_025345
Two-component system [BR:pza02022]
 NtrC family
  HydH-HydG (metal tolerance)
   HU749_025345
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg AAA_5 AAA_2 AAA_16 Mg_chelatase AAA HTH_11 HTH_23 HTH_AsnC-type AAA_22 HTH_8 RWP-RK nSTAND3 MCM AAA_7
Other DBs
NCBI-ProteinID: QXH94111
LinkDB
Position
5741544..5742977
AA seq 477 aa
MPHILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIPTFDLIVSDLRLPGAPG
TELIKLGQGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDRQAAT
SNPVEPAGKASASAKAGASNNNGEIGIIGSCPPMQDLYSKIRKVAPTDSNVLIQGESGTG
KELVARALHNLSRRAKAPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLVEAADG
GTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAKIGQF
REDLYYRLHVIALKLPALRERGADVNEIAQAFLARQSARVNRTDLKFAPDAEQAIRHYAW
PGNVRELENAVERAVILCESPEISADLLGIDIELSDLDDEEFIGLAPQQGGAANNTSHEP
TEDLSLEDYFQHFVLEHQDHMTETELARKLGVSRKCLWERRQRLGIPRRKTGATSES
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgccgcacattttgatcgtcgaagacgaaacaattatccgctccgccttgcgccgcctg
ctggaacgcaaccagtaccaggtcagcgaagccggttcagtgcaggaagcacaagaacgt
ttcagcattcccacgtttgacctgatcgtcagcgacctgcgcctgcccggcgccccgggc
accgagctgatcaagctcggccagggcacccccgtgctgatcatgaccagttacgccagc
ctgcgctcggcggtcgactccatgaaaatgggcgcggtggactacatcgccaaaccgttc
gaccacgacgagatgctccaggccgtggcccgcatcctgcgcgaccgacaggcggcgacc
agcaacccggtggagcccgccggcaaggccagcgcctcggcgaaagccggcgccagcaac
aataatggcgaaattggcatcatcggttcctgcccgcccatgcaggacctgtacagcaag
atccgcaaagtggcgccaaccgactccaatgtcctgatccagggcgagtccggtaccggc
aaggagctggtggcccgagccctgcacaacctgtcacgccgggccaaggcgccgatgatc
tcggtgaactgcgcggcgattccggaaagcctgatcgagtccgaactgttcggtcacgag
aaaggtgcgttcaccggcgccagcgccgggcgggccgggctggtggaagccgcggacggc
ggcacgttgttcctcgatgaaatcggcgagctgccactggaagcccaggcgcggttgctg
cgggtgcttcaggaaggcgaaatccgccgggtcggctcggtgcagtcacagaaggtcgat
gtccgtctgatcgcggccacccaccgcgacctcaagagcctggcgaaaatcggccagttc
cgcgaagacttgtattaccgcttgcacgtgatcgccttgaagctccctgccctgcgcgag
cgcggcgcggacgtcaatgaaattgcccaggcgtttttggcccgccagagcgcgcgggtc
aaccgcaccgacctcaagttcgccccggacgccgaacaggccattcgtcattacgcctgg
ccgggtaacgttcgcgagctggaaaacgcggtcgaacgggcggtgatcctgtgcgagagc
ccggaaatctccgccgacctgctgggcatcgacatcgaactgagtgacctggacgacgaa
gaattcatcggcctggccccgcaacagggcggcgctgccaacaacaccagccacgaaccc
accgaagacctgtccctggaagactacttccagcacttcgtactggagcaccaggaccac
atgaccgagaccgaactggcacgcaagctgggcgtcagccgcaagtgcctgtgggaacgt
cgccagcgcctggggattccacggcgcaagaccggagcgaccagcgaaagctga

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