Pseudomonas ogarae SWRI108: HU749_025730
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Entry
HU749_025730 CDS
T07889
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza00260
Glycine, serine and threonine metabolism
pza00460
Cyanoamino acid metabolism
pza00630
Glyoxylate and dicarboxylate metabolism
pza00670
One carbon pool by folate
pza00680
Methane metabolism
pza01100
Metabolic pathways
pza01110
Biosynthesis of secondary metabolites
pza01120
Microbial metabolism in diverse environments
pza01200
Carbon metabolism
pza01230
Biosynthesis of amino acids
pza01240
Biosynthesis of cofactors
pza04981
Folate transport and metabolism
Module
pza_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HU749_025730
09102 Energy metabolism
00680 Methane metabolism
HU749_025730
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HU749_025730
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HU749_025730
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HU749_025730
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HU749_025730
Enzymes [BR:
pza01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HU749_025730
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QXH94180
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Position
5824321..5825574
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKQLFGADYANVQPHAGSQANSAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDGNGLIDYDEVERLALEHKPKMIVAGFSAYSQI
LDFPRFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAKAMAGV
FIERGFDVVSGGTENHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cccgcggtgatggaagctcaaggctcggtactgaccaacaagtacgccgaaggctacccg
ggcaagcgttactacggtggttgcgagtacgtcgacgtggtcgagcaactggccatcgac
cgcgccaagcaactgttcggtgccgactatgccaacgtccagccgcacgcaggctcccaa
gccaactccgccgtgtacctggcgctgctgtcggccggtgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtttcctcctccggcaagctgtac
aacgccgtccagtacggcatcgacggcaacggcctgatcgactacgacgaagtcgagcgc
ctggccctcgagcacaagccgaaaatgatcgtggccggtttctccgcctactcccagatc
ctcgacttcccgcgtttccgcgagatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgtggccggtctggtcgccgctggcgtctacccgaacccggtgccattcgcc
gacgtggtcaccaccaccacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gcgcgcgccaatgccgacatcgagaagaagctgaactccgccgtcttcccgggcgcccag
ggtggcccgctggagcacgtgatcgcagccaaggcgatctgcttcaaggaagccctgcaa
cctgagttcaaggcttaccagcaacaagtggtgaagaatgccaaggccatggccggcgtg
ttcatcgagcgcggcttcgacgtggtgtccggcggtactgaaaaccacctgttcctgttg
tcgctgatcaagcaagagatctccggcaaagacgccgacgcggcgctgggcaaggcattc
atcaccgtcaacaagaactcggtgccaaacgacccacgctctccgttcgtcacctcgggc
ctgcgtttcggtaccccagccgtgaccactcgcggtttcaaggaagccgagtgcaaggaa
ctggctggctggatctgcgacatcctggcggacctgaacaacgaagcggtcatcgacgcc
gtgcgtgagaaggtcaaggcgatctgcaagaagctgccggtctacggcgcttaa
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