Pseudomonas ogarae SWRI108: HU749_026140
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Entry
HU749_026140 CDS
T07889
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza03030
DNA replication
pza03430
Mismatch repair
pza03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU749_026140 (holA)
03430 Mismatch repair
HU749_026140 (holA)
03440 Homologous recombination
HU749_026140 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pza03032
]
HU749_026140 (holA)
03400 DNA repair and recombination proteins [BR:
pza03400
]
HU749_026140 (holA)
Enzymes [BR:
pza01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU749_026140 (holA)
DNA replication proteins [BR:
pza03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HU749_026140 (holA)
DNA repair and recombination proteins [BR:
pza03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HU749_026140 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
CCCAP
Motif
Other DBs
NCBI-ProteinID:
QXH94253
LinkDB
All DBs
Position
5913069..5914106
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLGKHLQGALAPVYIISGDDPLLCQEAADAIRSAARQQGFDERQVFAADASFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYCSRPAEDTVLLISLPKLDGSA
QKTKWGKALVEGQQTQFVQIWPVDVSQLPSWIRQRLSQAGLSASQDAVELIAARVEGNLL
AAAQEIEKLKLMAEGGQITVETVQAAVADSARFDVFGLTDAILNGEAAHALRMLEGLRGE
GVEPPVILWALARELRLLANLSLQYSQGVPLDKAFGQARPPVWDKRKPLMSKALQRYSAS
RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMAGQRLTLPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggcccccgctcaactcggcaaacacctgcaaggcgccctcgcgccggtctac
atcatcagtggcgatgacccgctgttgtgccaggaagccgccgacgccatccgctctgct
gcacgccagcagggcttcgacgagcgccaggtattcgccgccgacgccagtttcgactgg
ggcacgctgctgcaggccggggcgagcatgtcgttgttcgccgaaaaacgcctgctggag
ctgcgcttgccgtcgggcaaacccggtgacaagggcgccgctgcgttgatcgaatattgc
tcacggcccgccgaggacaccgtgctgctcatcagcttgccgaaactcgatggcagcgcg
caaaagaccaaatggggcaaggccctggtcgaaggccagcagacccagttcgtgcagatc
tggccggtggatgtcagccagttgcccagctggatccgccagcgcctgtcccaggccggt
ctctcggccagccaggacgccgtggagctgattgccgcccgggtcgaaggcaacctgttg
gccgccgcccaggaaatcgaaaagctcaaactaatggccgaaggcgggcagatcaccgtg
gaaacggtgcaggctgccgtggccgacagcgcgcgcttcgatgtcttcgggctgaccgat
gcgatcctcaacggtgaggccgcccatgcgctgcgcatgctcgaaggcctgcggggcgaa
ggcgtcgagccgccggtgatcctctgggccctggcccgggaattgcgcctgctggccaac
ctgtccctgcaatatagccagggcgtaccgctggacaaagccttcggccaggcccgtcca
cccgtctgggacaagcgcaaaccgctgatgagcaaggccctgcaacgctattccgcatcg
cgctgggcgcaattgctgctcgaggcccagcgcatcgatgcgcagatcaagggccaggcc
gctggctcgccatggatgagcctcagtcgcttgtcgctgttgatggctgggcagcggttg
acgttgcctgccgaataa
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