Pseudomonas ogarae SWRI108: HU749_026180
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Entry
HU749_026180 CDS
T07889
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pza
Pseudomonas ogarae SWRI108
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pza01011
]
HU749_026180
Enzymes [BR:
pza01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HU749_026180
Peptidoglycan biosynthesis and degradation proteins [BR:
pza01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HU749_026180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
QXH94260
LinkDB
All DBs
Position
complement(5921176..5922201)
Genome browser
AA seq
341 aa
AA seq
DB search
MRALPTYLPLKAKPLKLVALAALSLLVVSCSTSRAPAQKSSTAVRATPGLDINRAHKDGA
PWWDVDVSRIPDATPTLHTGPYKANPYTVLGKTYFPMAESKRYVASGTASWYGTKFHGQN
TANGEVYDLYGMSAAHKTLPLPSYVRVTNLDNNKTVILRVNDRGPFYSDRIIDLSYAAAK
KLGYAETGTARVKVEGIDPQEWWAQRGRPAPLMLNEPKVAQNAAPTVTASTGTVEQWTPP
PQQHAAAVLPVQIDAKKNASATASGQFLQVGAFANPDAAELLRSKLSSMVSAPVFISSIV
RNQQTLHRVRLGPIGSPGEVQQVQNSVRLANLGSPSLVTAE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcattgcctacctatctacccctgaaagccaagcccctcaagctcgtggcgttg
gccgcgctgtcgctgttggtcgtcagttgttcgaccagccgcgcgccggcccagaaaagc
tccaccgctgtgcgcgcgacgccgggcctggacatcaaccgggcccacaaggacggcgca
ccgtggtgggacgtggacgtctcgcgcattcccgacgccacgccgaccctgcacaccggc
ccgtacaaggccaacccgtacacggtgctgggcaagacctatttcccgatggccgagtcc
aagcgctacgtggcctcgggcacggcgtcctggtacggcaccaagttccacggccagaac
accgccaatggcgaggtgtatgacctgtatggcatgagcgcggcgcacaagaccttgccg
ctgcccagctatgtgcgggtgaccaacctggacaacaacaagaccgtgatcctgcgggtc
aatgaccgtgggccgttctattccgatcgcatcatcgacttgtcgtatgcggcggcgaaa
aagctcggttacgctgaaaccggtaccgcccgggtcaaggtcgaaggcatcgacccgcaa
gaatggtgggcccaacgcggccgtccggcgcctttgatgctcaacgagccgaaagtggcg
caaaatgccgcgccaaccgtgacggcgtccaccggcacggtcgagcagtggacaccaccg
ccgcagcaacacgccgcggccgtgctgccggtacagatcgatgcaaaaaaaaacgcttct
gcaacagcgtctggccagtttctgcaagtgggcgcgttcgccaacccggacgctgccgag
ctgctgaggtcgaagctcagctcgatggtgagcgctccggtgttcatcagctcgatcgtg
cgcaaccagcagacactgcatcgggtgcgcctggggccgatcggttctccgggtgaagtc
cagcaagtgcagaacagtgtgcgcctggccaatctcggttcgccgagcctggtcaccgcc
gagtaa
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