Pseudomonas ogarae SWRI108: HU749_026275
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Entry
HU749_026275 CDS
T07889
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pza
Pseudomonas ogarae SWRI108
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pza03000
]
HU749_026275
Transcription factors [BR:
pza03000
]
Prokaryotic type
Helix-turn-helix
Other families
HU749_026275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
GAF
AAA_5
PAS_4
PAS_8
AAA_2
HTH_23
Diguanyl_cycl_sensor
HTH_7
AAA
HTH_20
HTH_30
PAS_9
HTH_28
Mg_chelatase
HTH_22
HTH_17
nSTAND3
HVO_A0261_N
HTH_50
Mga
HTH_10
IclR_C
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QXH94278
LinkDB
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Position
complement(5939609..5941516)
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AA seq
635 aa
AA seq
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MHSNHLSRHAQQVLTVTQGKAHLQGPGSDPSIARSWLRCLEDYHLDPAQNLAPTVLEHGR
VLESRERLQQVLHIAGNEMTSLHQQLSGAGHAVLLTDARGVILNCVTAPSERKIFERAGL
WLGADWSEACEGTNGIGTCLVERQALTIHQEEHFRGRHTGLTCSASPVFDPQGELLAVLD
VSSARPDVSRQSQFHTMALVNLSAKMIESCYFLRCFDNQWLLRFHLQAESVGLFSEGLMA
FDGEGRISAVNQSALNLLGHIRGSLLGQRVEDFFDCSLDELLGRASVNASASWPLRTRDG
RHLFAVLRGQPRSVPVPVAPLLKAIEPARLPGICLGDAALQEHFRKALRVFERDVPLLIQ
GETGSGKEAFAKAVHHASQRAGKHFVALNCAAIPESLIESELFGYRGGSFTGARKEGMRG
KLQQADGGTLFLDEIGDMPLALQTRLLRVLEDRQVVPLGGEPEAVNVRIISATHRQLLDR
VRDGSFREDLYYRLNGLEIPLPALRERSDKSQLLDFLLAEESGAETVSIDEPARQALLGF
DWPGNVRQLRNVLRTLAALCDGGRIGLEDLPAMIRQRPSMALVETVAERPLADAERLALL
DALERQRWHMTHTAEQLGISRNTLYRKLRKHAIAR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcaaccatttgagtcgccatgcccagcaagtcctgacggtcacccagggcaag
gcccatttgcagggccctggcagcgatccgtcgattgcccgttcctggctgcgctgcctc
gaggactatcacctcgacccggcccagaacctggcgccgacggtgctcgaacatggccgg
gtgctggaaagccgcgagcgcttgcagcaagtgctgcacatcgccggcaatgaaatgacc
agcctgcaccagcaactctccggcgccggccacgcggtgctgctgaccgacgcccgaggc
gtgatcctcaactgcgtcaccgcccccagcgaacggaagattttcgaacgggccggcctc
tggctcggtgccgactggagcgaagcctgcgaaggcaccaacggcatcggcacctgcctg
gtggagcgccaggccctgaccatccaccaggaagaacattttcgcggccgccacaccggc
ctgacctgctcggccagcccggtcttcgatccccagggcgaactgctggcggtgctcgac
gtgtcttcggcccgcccggacgtctcgcgccagagccagttccacaccatggccctggtc
aatctctcggcgaagatgatcgagagctgctatttcctgcgttgcttcgacaatcaatgg
ttgctgcgctttcacttgcaggccgagtccgtgggactgttcagcgaaggcttgatggcg
tttgacggtgaagggcggatcagcgccgtcaaccagagcgcgctgaacctcttggggcat
attcgcggcagtttgctcggtcagcgggtggaggactttttcgactgttcgttggacgaa
ttactcggccgcgcgagtgtaaatgccagtgcgagctggccgctgcgcacccgtgacggt
cggcatttgttcgccgtgttgcgggggcagccgcgcagcgtgccggtgccggttgcgccg
ctgctcaaggccatcgagcccgcccgcctgccaggcatctgcctgggggacgcggcattg
caggaacattttcgtaaggcgctgcgggtgttcgagcgcgatgtaccgctgctgattcag
ggcgaaaccggctccggcaaggaggcgttcgccaaggccgtgcaccacgccagccagcgc
gccggcaagcattttgtcgccctcaactgcgcggccatcccggaaagcctgatcgagagc
gagctgttcggttatcgcggcggcagcttcaccggcgcgcgcaaggaaggcatgcgtggc
aagctgcaacaggccgacggcggcacgctgttcctcgatgaaatcggcgacatgcccctg
gccttgcagacccgtttgctgcgggtgctggaagaccgccaagtggtgcccctcggcggc
gagcccgaggcggtgaacgtgcgcatcatcagcgccacccaccggcagttgctcgaccgg
gtgcgcgatggcagtttccgcgaggatttgtactaccgcctcaacggtttggaaatcccg
ctgccggcgttgcgcgaacgcagcgacaagtcgcagttgctggattttctgctggctgaa
gagagcggggccgagacggtgtccatcgacgaaccggcgcgccaggcgttgctggggttc
gactggccgggcaacgtgcggcaactgcgcaacgtgctgcggacccttgccgcgctgtgc
gatggcgggcggatcgggctggaagacttgccggccatgatccgccagcgtccgtcgatg
gcgctggttgaaacggtggcggagcggccgctggcggatgccgagcgcctggcactgctc
gacgcactggagcgccagcgctggcacatgacccacacggcggaacaactggggatcagc
cgcaataccctctaccgcaagctgcgtaagcacgcgattgcccgctga
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