Pseudomonas ogarae SWRI108: HU749_026540
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Entry
HU749_026540 CDS
T07889
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pza
Pseudomonas ogarae SWRI108
Pathway
pza00900
Terpenoid backbone biosynthesis
pza01100
Metabolic pathways
pza01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HU749_026540 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pza01006
]
HU749_026540 (ispA)
Enzymes [BR:
pza01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HU749_026540 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HU749_026540 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
HU749_026540 (ispA)
Prenyltransferases [BR:
pza01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HU749_026540 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QXH94328
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All DBs
Position
6007569..6008456
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AA seq
295 aa
AA seq
DB search
MIGAYQASSQARVNAALDSLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGG
QAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLA
FSALLDPALSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHRHK
TGALIEASVKLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGA
DIARDKPTYPALLGLDAAKAYALELRDQALAALRPFDAAAEPLRDLARYIVERRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgcctatcaggccagcagccaggcccgggtcaatgctgcattggatagcttg
ttcagcgccccgagcccggaactggcgcgcctgtacgaagccatgcgctacagcgtgatg
aacggcggcaagcgtgtccggccgctgttggcctacgccgcgtgcgaagccttgggcggc
caggccgaacaggccaacggtgccgcctgtgcggtggagttgatccacgcgtattcgctg
gtgcacgacgatttgccggccatggacgacgacgacctgcgtcgcggccagcccaccacc
cacaagcaattcgacgaagcctgcgcgatcctggccggcgacggtttgcagagcctggcc
ttcagcgccctgctggacccggccctgagcgattgcccggcgcaggttcgcctggacatg
gtcagtgccctggcgctggcggcaggccctgccggaatggtcggcggccaggccatcgat
ttgggctcagtgggcctgaagctggaccagagcgccctggaatacatgcatcggcacaag
actggcgccttgatcgaagccagcgtcaaactcggtgccctggccagcggccgggccacg
cccgcccagttgcaagccttgcagacctacgcccgagccatcggcctggcattccaggtg
caggacgacatcctcgacgtcgaaagcgatacccagaccctgggcaaacgccagggcgcc
gacatcgcccgcgacaagccgacctacccggccctgctcggcctcgacgctgccaaggcc
tacgccctggagttgcgcgaccaggccctggccgcgctgcgaccctttgacgcggcggcc
gagccgttgcgcgacttggcgcgttatatcgtcgaacgacgcagctga
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